8efb: Difference between revisions

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'''Unreleased structure'''


The entry 8efb is ON HOLD  until Paper Publication
==Oliceridine-bound mu-opioid receptor-Gi complex==
 
<StructureSection load='8efb' size='340' side='right'caption='[[8efb]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
Authors: Zhuang, Y., Wang, Y., Guo, S., Zhou, X.E., Rao, Q., He, X., He, B., Liu, J., Zhou, Q., Wang, X., Liu, W., Jiang, X., Yang, D., Chen, X., Jiang, Y., Jiang, H., Shen, J., Melcher, K., Wang, M., Xie, X., Xu, H.E.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[8efb]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8EFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8EFB FirstGlance]. <br>
Description: Oliceridine-bound mu-opioid receptor-Gi complex
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=WH2:N-[(3-methoxythiophen-2-yl)methyl]-2-[(9R)-9-(pyridin-2-yl)-6-oxaspiro[4.5]decan-9-yl]ethan-1-amine'>WH2</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8efb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8efb OCA], [https://pdbe.org/8efb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8efb RCSB], [https://www.ebi.ac.uk/pdbsum/8efb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8efb ProSAT]</span></td></tr>
[[Category: Wang, M]]
</table>
[[Category: Zhou, X.E]]
== Function ==
[[Category: Xu, H.E]]
[https://www.uniprot.org/uniprot/OPRM_HUMAN OPRM_HUMAN] Receptor for endogenous opioids such as beta-endorphin and endomorphin (PubMed:12589820, PubMed:7891175, PubMed:7905839, PubMed:10529478, PubMed:7957926, PubMed:9689128). Receptor for natural and synthetic opioids including morphine, heroin, DAMGO, fentanyl, etorphine, buprenorphin and methadone (PubMed:12589820, PubMed:7891175, PubMed:7905839, PubMed:7957926, PubMed:10529478, PubMed:9689128, PubMed:10836142, PubMed:19300905). Also activated by enkephalin peptides, such as Met-enkephalin or Met-enkephalin-Arg-Phe, with higher affinity for Met-enkephalin-Arg-Phe (By similarity). Agonist binding to the receptor induces coupling to an inactive GDP-bound heterotrimeric G-protein complex and subsequent exchange of GDP for GTP in the G-protein alpha subunit leading to dissociation of the G-protein complex with the free GTP-bound G-protein alpha and the G-protein beta-gamma dimer activating downstream cellular effectors (PubMed:7905839). The agonist- and cell type-specific activity is predominantly coupled to pertussis toxin-sensitive G(i) and G(o) G alpha proteins, GNAI1, GNAI2, GNAI3 and GNAO1 isoforms Alpha-1 and Alpha-2, and to a lesser extent to pertussis toxin-insensitive G alpha proteins GNAZ and GNA15 (PubMed:12068084). They mediate an array of downstream cellular responses, including inhibition of adenylate cyclase activity and both N-type and L-type calcium channels, activation of inward rectifying potassium channels, mitogen-activated protein kinase (MAPK), phospholipase C (PLC), phosphoinositide/protein kinase (PKC), phosphoinositide 3-kinase (PI3K) and regulation of NF-kappa-B (By similarity). Also couples to adenylate cyclase stimulatory G alpha proteins (By similarity). The selective temporal coupling to G-proteins and subsequent signaling can be regulated by RGSZ proteins, such as RGS9, RGS17 and RGS4 (By similarity). Phosphorylation by members of the GPRK subfamily of Ser/Thr protein kinases and association with beta-arrestins is involved in short-term receptor desensitization (By similarity). Beta-arrestins associate with the GPRK-phosphorylated receptor and uncouple it from the G-protein thus terminating signal transduction (By similarity). The phosphorylated receptor is internalized through endocytosis via clathrin-coated pits which involves beta-arrestins (By similarity). The activation of the ERK pathway occurs either in a G-protein-dependent or a beta-arrestin-dependent manner and is regulated by agonist-specific receptor phosphorylation (By similarity). Acts as a class A G-protein coupled receptor (GPCR) which dissociates from beta-arrestin at or near the plasma membrane and undergoes rapid recycling (By similarity). Receptor down-regulation pathways are varying with the agonist and occur dependent or independent of G-protein coupling (By similarity). Endogenous ligands induce rapid desensitization, endocytosis and recycling (By similarity). Heterooligomerization with other GPCRs can modulate agonist binding, signaling and trafficking properties (By similarity).[UniProtKB:P33535]<ref>PMID:10529478</ref> <ref>PMID:12068084</ref> <ref>PMID:12589820</ref> <ref>PMID:7891175</ref> <ref>PMID:7905839</ref> <ref>PMID:7957926</ref> <ref>PMID:9689128</ref> <ref>PMID:10836142</ref> <ref>PMID:19300905</ref>  Couples to GNAS and is proposed to be involved in excitatory effects.<ref>PMID:20525224</ref>  Does not bind agonists but may act through oligomerization with binding-competent OPRM1 isoforms and reduce their ligand binding activity.<ref>PMID:16580639</ref>  Does not bind agonists but may act through oligomerization with binding-competent OPRM1 isoforms and reduce their ligand binding activity.<ref>PMID:16580639</ref>
[[Category: Melcher, K]]
== References ==
[[Category: He, X]]
<references/>
[[Category: Chen, X]]
__TOC__
[[Category: Yang, D]]
</StructureSection>
[[Category: Liu, W]]
[[Category: Bos taurus]]
[[Category: Guo, S]]
[[Category: Homo sapiens]]
[[Category: He, B]]
[[Category: Large Structures]]
[[Category: Jiang, Y]]
[[Category: Rattus norvegicus]]
[[Category: Wang, Y]]
[[Category: Synthetic construct]]
[[Category: Xie, X]]
[[Category: Chen X]]
[[Category: Zhuang, Y]]
[[Category: Guo S]]
[[Category: Zhou, Q]]
[[Category: He B]]
[[Category: Jiang, H]]
[[Category: He X]]
[[Category: Liu, J]]
[[Category: Jiang H]]
[[Category: Wang, X]]
[[Category: Jiang X]]
[[Category: Shen, J]]
[[Category: Jiang Y]]
[[Category: Jiang, X]]
[[Category: Liu J]]
[[Category: Rao, Q]]
[[Category: Liu W]]
[[Category: Melcher K]]
[[Category: Rao Q]]
[[Category: Shen J]]
[[Category: Wang M]]
[[Category: Wang X]]
[[Category: Wang Y]]
[[Category: Xie X]]
[[Category: Xu HE]]
[[Category: Yang D]]
[[Category: Zhou Q]]
[[Category: Zhou XE]]
[[Category: Zhuang Y]]

Revision as of 07:36, 9 November 2022

Oliceridine-bound mu-opioid receptor-Gi complex

8efb, resolution 3.20Å

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