4k2b: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:


==Crystal structure of ntda from bacillus subtilis in complex with the internal aldimine==
==Crystal structure of ntda from bacillus subtilis in complex with the internal aldimine==
<StructureSection load='4k2b' size='340' side='right' caption='[[4k2b]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
<StructureSection load='4k2b' size='340' side='right'caption='[[4k2b]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4k2b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K2B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4K2B FirstGlance]. <br>
<table><tr><td colspan='2'>[[4k2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K2B FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4k2i|4k2i]], [[4k2m|4k2m]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k2b OCA], [https://pdbe.org/4k2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k2b RCSB], [https://www.ebi.ac.uk/pdbsum/4k2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k2b ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">939788, BSU10550, NP_388936.1, ntdA, yhjL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU]), BSU10550, ntda, yhjL, 939788, NP_388936.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224308 BACSU])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4k2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k2b OCA], [http://pdbe.org/4k2b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4k2b RCSB], [http://www.ebi.ac.uk/pdbsum/4k2b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4k2b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/NTDA_BACSU NTDA_BACSU]] Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic.  
[https://www.uniprot.org/uniprot/NTDA_BACSU NTDA_BACSU] Part of the ntdABC operon that biosynthesizes the NTD (3,3'-neotrehalosadiamine) antibiotic.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacsu]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Palmer, D R.J]]
[[Category: Large Structures]]
[[Category: Sanders, D A.R]]
[[Category: Palmer DRJ]]
[[Category: Straaten, K E.Van]]
[[Category: Sanders DAR]]
[[Category: Additional n-terninal domain]]
[[Category: Van Straaten KE]]
[[Category: Aspertate aminotransferase fold]]
[[Category: Homo-dimer]]
[[Category: Sugar aminotransferase]]
[[Category: Transferase]]