4ml0: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older editNewer edit →
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
Line 3: Line 3:
<StructureSection load='4ml0' size='340' side='right'caption='[[4ml0]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='4ml0' size='340' side='right'caption='[[4ml0]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ml0]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobr Ecobr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ML0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ML0 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ml0]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_B_str._REL606 Escherichia coli B str. REL606]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ML0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ML0 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ml2|4ml2]], [[4mmg|4mmg]], [[4mmj|4mmj]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ml0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ml0 OCA], [https://pdbe.org/4ml0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ml0 RCSB], [https://www.ebi.ac.uk/pdbsum/4ml0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ml0 ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dinJ, ECB_00221 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=413997 ECOBR]), yafQ, ECB_00220 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=413997 ECOBR])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ml0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ml0 OCA], [http://pdbe.org/4ml0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ml0 RCSB], [http://www.ebi.ac.uk/pdbsum/4ml0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ml0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DINJ_ECOBD DINJ_ECOBD] Antitoxin component of a type II toxin-antitoxin (TA) system (PubMed:24923448). A labile antitoxin that counteracts the effect of cognate toxin YafQ (PubMed:24923448). The YafQ-DinJ heterotetramer binds the consensus sequence 5'-TTTGAGCTACA-3' in the dinJ promoter; DinJ also binds DNA but not as well as the YafQ-DinJ complex (PubMed:24923448). Binding to the dinJ represses expression of the promoter (By similarity).[UniProtKB:Q47150]<ref>PMID:24923448</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Ecobr]]
[[Category: Escherichia coli B str. REL606]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Dong, Y H]]
[[Category: Dong YH]]
[[Category: Gao, Z Q]]
[[Category: Gao ZQ]]
[[Category: Liang, Y J]]
[[Category: Liang YJ]]
[[Category: Liu, Q S]]
[[Category: Liu QS]]
[[Category: Interferase]]
[[Category: Rhh motif]]
[[Category: Toxin-antitoxin complex]]
Retrieved from "https://proteopedia.org/4ml0"