4n1z: Difference between revisions

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<StructureSection load='4n1z' size='340' side='right'caption='[[4n1z]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
<StructureSection load='4n1z' size='340' side='right'caption='[[4n1z]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4n1z]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N1Z OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4N1Z FirstGlance]. <br>
<table><tr><td colspan='2'>[[4n1z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N1Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4N1Z FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=N1Z:HYDROGEN+[(1S)-1-HYDROXY-2-(3-OCTYL-1H-IMIDAZOL-3-IUM-1-YL)-1-PHOSPHONOETHYL]PHOSPHONATE'>N1Z</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=N1Z:HYDROGEN+[(1S)-1-HYDROXY-2-(3-OCTYL-1H-IMIDAZOL-3-IUM-1-YL)-1-PHOSPHONOETHYL]PHOSPHONATE'>N1Z</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ga3|4ga3]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4n1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n1z OCA], [https://pdbe.org/4n1z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4n1z RCSB], [https://www.ebi.ac.uk/pdbsum/4n1z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4n1z ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FDPS, FPS, KIAA1293 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4n1z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4n1z OCA], [http://pdbe.org/4n1z PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4n1z RCSB], [http://www.ebi.ac.uk/pdbsum/4n1z PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4n1z ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/FPPS_HUMAN FPPS_HUMAN]] Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.  
[https://www.uniprot.org/uniprot/FPPS_HUMAN FPPS_HUMAN] Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Farnesyl diphosphate synthase|Farnesyl diphosphate synthase]]
*[[Farnesyl diphosphate synthase 3D structures|Farnesyl diphosphate synthase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Liu, Y L]]
[[Category: Liu YL]]
[[Category: Oldfield, E]]
[[Category: Oldfield E]]
[[Category: Verma, I]]
[[Category: Verma I]]
[[Category: Xia, Y]]
[[Category: Xia Y]]
[[Category: Zhang, Y]]
[[Category: Zhang Y]]
[[Category: Alpha fold]]
[[Category: Cytosol]]
[[Category: Dephosphorylation]]
[[Category: Ionization]]
[[Category: Synthase]]
[[Category: Transferase]]

Revision as of 10:27, 28 December 2022

Crystal Structure of Human Farnesyl Diphosphate Synthase in Complex with BPH-1222

4n1z, resolution 2.35Å

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