4pk1

Structure of BamB fused to a BamA POTRA domain fragment

spinqualitylabelsall models 4pk1, resolution 3.10Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 4pk1 is a 1 chain structure with sequence from Escherichia coli K-12. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function BAMA_ECOLI Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. BAMB_ECOLI Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex, which may orient the flexible periplasmic domain of BamA for interaction with other Bam components, chaperones and nascent outer membrane proteins. Publication Abstract from PubMed The beta-Barrel Assembly Machinery (BAM) mediates folding and insertion of beta-barrel outer membrane proteins (OMPs) into the outer membrane of Gram-negative bacteria. BAM is a five protein complex consisting of the beta-barrel OMP BamA and lipoproteins BamB, C, D, and E. High resolution structures of all the individual BAM subunits and a BamD-BamC complex have been determined. However, the overall complex architecture remains elusive. BamA is the central component of BAM and consists of a membrane embedded beta-barrel and a periplasmic domain with five Polypeptide Translocation Associated (POTRA) motifs thought to interact with the accessory lipoproteins. Here we report the crystal structure of a fusion between BamB and a POTRA3-5 fragment of BamA. Extended loops 13 and 17 protruding from one end of the BamB beta-propeller contact the face of the POTRA3 beta-sheet in BamA. The interface is stabilized by several hydrophobic contacts, a network of hydrogen bonds, and a cation-pi interaction between BamA Y255 and BamB R195. Disruption of BamA:BamB binding by BamA Y255A and probing of the interface by disulfide bond crosslinking validate the physiological relevance of the observed interface. Furthermore, the structure is consistent with previously published mutagenesis studies. The periplasmic five-POTRA domain of BamA is flexible in solution due to hinge motions in the POTRA2-3 linker. Modeling BamB in complex with full-length BamA shows BamB binding at the POTRA2-3 hinge suggesting a role in modulation of BamA flexibility and the conformational changes associated with OMP folding and insertion. Crystal Structure of BamB Bound to a Periplasmic Domain Fragment of BamA, the Central Component of the beta-Barrel Assembly Machine.,Jansen KB, Baker SL, Sousa MC J Biol Chem. 2014 Dec 2. pii: jbc.M114.584524. PMID:25468906 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See Also Bam complex 3D structures

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