4r87: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
Line 1: Line 1:


==Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with CoA and spermine==
==Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with CoA and spermine==
<StructureSection load='4r87' size='340' side='right' caption='[[4r87]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
<StructureSection load='4r87' size='340' side='right'caption='[[4r87]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4r87]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R87 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R87 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4r87]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R87 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R87 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3eg7|3eg7]], [[4jjx|4jjx]], [[4jly|4jly]], [[4k4l|4k4l]], [[4mi4|4mi4]], [[4r57|4r57]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r87 OCA], [https://pdbe.org/4r87 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r87 RCSB], [https://www.ebi.ac.uk/pdbsum/4r87 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r87 ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VC_A0947 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r87 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r87 OCA], [http://pdbe.org/4r87 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r87 RCSB], [http://www.ebi.ac.uk/pdbsum/4r87 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r87 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/ATDA_VIBCH ATDA_VIBCH] Involved in the protection against polyamine toxicity by regulating their concentration. Catalyzes the transfer of an acetyl group from acetyl coenzyme A (AcCoA) to the primary amino groups of spermidine to yield N(1)- and N(8)-acetylspermidine. It can use polyamines such as spermine and N(1)-acetylspermine, but not putrescine or cadaverine.<ref>PMID:23184347</ref> <ref>PMID:25623305</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 18:
</div>
</div>
<div class="pdbe-citations 4r87" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4r87" style="background-color:#fffaf0;"></div>
==See Also==
*[[Spermidine/spermine N-acetyltransferase|Spermidine/spermine N-acetyltransferase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibch]]
[[Category: Large Structures]]
[[Category: Anderson, W F]]
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
[[Category: Structural genomic]]
[[Category: Anderson WF]]
[[Category: Filippova, E V]]
[[Category: Filippova EV]]
[[Category: Kiryukhina, O]]
[[Category: Kiryukhina O]]
[[Category: Kuhn, M L]]
[[Category: Kuhn ML]]
[[Category: Minasov, G]]
[[Category: Minasov G]]
[[Category: Coenzyme some]]
[[Category: Csgid]]
[[Category: Spermidine]]
[[Category: Spermine]]
[[Category: Transferase]]