4ubs: Difference between revisions

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<StructureSection load='4ubs' size='340' side='right'caption='[[4ubs]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='4ubs' size='340' side='right'caption='[[4ubs]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ubs]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Straw Straw]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UBS FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ubs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avermitilis_MA-4680_=_NBRC_14893 Streptomyces avermitilis MA-4680 = NBRC 14893]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UBS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UBS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIF:2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC+ACID'>DIF</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIF:2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC+ACID'>DIF</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cyp105d7, cyp28, SAV_7469 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=227882 STRAW])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ubs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubs OCA], [https://pdbe.org/4ubs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ubs RCSB], [https://www.ebi.ac.uk/pdbsum/4ubs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubs ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pentalenic_acid_synthase Pentalenic acid synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.15.11 1.14.15.11] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ubs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ubs OCA], [http://pdbe.org/4ubs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ubs RCSB], [http://www.ebi.ac.uk/pdbsum/4ubs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ubs ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/CYP28_STRAW CYP28_STRAW]] Catalyzes the conversion of 1-deoxypentalenic acid to pentalenic acid in the biosynthesis of neopentalenolactone antibiotic.<ref>PMID:21081950</ref>
[https://www.uniprot.org/uniprot/CYP28_STRAW CYP28_STRAW] Catalyzes the conversion of 1-deoxypentalenic acid to pentalenic acid in the biosynthesis of neopentalenolactone antibiotic.<ref>PMID:21081950</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Pentalenic acid synthase]]
[[Category: Streptomyces avermitilis MA-4680 = NBRC 14893]]
[[Category: Straw]]
[[Category: Arakawa T]]
[[Category: Arakawa, T]]
[[Category: Fushinobu S]]
[[Category: Fushinobu, S]]
[[Category: Ikeda H]]
[[Category: Ikeda, H]]
[[Category: Shoun H]]
[[Category: Shoun, H]]
[[Category: Wakagi T]]
[[Category: Wakagi, T]]
[[Category: Xu LH]]
[[Category: Xu, L H]]
[[Category: Cytochrome p450]]
[[Category: Diclofenac]]
[[Category: Hydroxylation]]
[[Category: Oxidoreductase]]
Retrieved from "https://proteopedia.org/4ubs"