6g1y: Difference between revisions

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==Crystal structure of the photosensory core module (PCM) of a bathy phytochrome from Agrobacterium fabrum in the Pfr state.==
==Crystal structure of the photosensory core module (PCM) of a bathy phytochrome from Agrobacterium fabrum in the Pfr state.==
<StructureSection load='6g1y' size='340' side='right' caption='[[6g1y]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='6g1y' size='340' side='right'caption='[[6g1y]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6g1y]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G1Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G1Y FirstGlance]. <br>
<table><tr><td colspan='2'>[[6g1y]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G1Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G1Y FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EL5:Biliverdin'>EL5</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EL5:3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic+acid'>EL5</scene>, <scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g1y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g1y OCA], [https://pdbe.org/6g1y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g1y RCSB], [https://www.ebi.ac.uk/pdbsum/6g1y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g1y ProSAT]</span></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6g1z|6g1z]], [[6g20|6g20]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Atu2165 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g1y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g1y OCA], [http://pdbe.org/6g1y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g1y RCSB], [http://www.ebi.ac.uk/pdbsum/6g1y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g1y ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A9CI81_AGRFC A9CI81_AGRFC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agrfc]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Qureshi, B M]]
[[Category: Large Structures]]
[[Category: Scheerer, P]]
[[Category: Qureshi BM]]
[[Category: Schmidt, A]]
[[Category: Scheerer P]]
[[Category: Bacteriophytochrome]]
[[Category: Schmidt A]]
[[Category: Bathy phytochrome]]
[[Category: Bilin chromophore]]
[[Category: Light adaptation]]
[[Category: Methylation]]
[[Category: Pfr state]]
[[Category: Photoisomerization]]
[[Category: Photosensory core module]]
[[Category: Phytochrome]]
[[Category: Signal transduction]]
[[Category: Signaling protein]]