5a4m: Difference between revisions

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<StructureSection load='5a4m' size='340' side='right'caption='[[5a4m]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='5a4m' size='340' side='right'caption='[[5a4m]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5a4m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_str._k-12_substr._mc4100 Escherichia coli str. k-12 substr. mc4100]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5A4M FirstGlance]. <br>
<table><tr><td colspan='2'>[[5a4m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_str._K-12_substr._MC4100 Escherichia coli str. K-12 substr. MC4100]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A4M FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFV:NI-FE+OXIDIZED+ACTIVE+CENTER'>NFV</scene>, <scene name='pdbligand=SF3:FE4-S3+CLUSTER'>SF3</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFV:NI-FE+OXIDIZED+ACTIVE+CENTER'>NFV</scene>, <scene name='pdbligand=SF3:FE4-S3+CLUSTER'>SF3</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5a4f|5a4f]], [[5a4i|5a4i]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4m OCA], [https://pdbe.org/5a4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a4m RCSB], [https://www.ebi.ac.uk/pdbsum/5a4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4m ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydrogenase_(acceptor) Hydrogenase (acceptor)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.99.6 1.12.99.6] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5a4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a4m OCA], [http://pdbe.org/5a4m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5a4m RCSB], [http://www.ebi.ac.uk/pdbsum/5a4m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5a4m ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/MBHL_ECOLI MBHL_ECOLI]] This is one of three E.coli hydrogenases synthesized in response to different physiological conditions. HYD1 is believed to have a role in hydrogen cycling during fermentative growth. [[http://www.uniprot.org/uniprot/MBHS_ECOLI MBHS_ECOLI]] This is one of three E.coli hydrogenases synthesized in response to different physiological conditions. HYD1 is believed to have a role in hydrogen cycling during fermentative growth.  
[https://www.uniprot.org/uniprot/MBHL_ECOLI MBHL_ECOLI] This is one of three E.coli hydrogenases synthesized in response to different physiological conditions. HYD1 is believed to have a role in hydrogen cycling during fermentative growth.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Escherichia coli str. k-12 substr. mc4100]]
[[Category: Escherichia coli str. K-12 substr. MC4100]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Armstrong, F A]]
[[Category: Armstrong FA]]
[[Category: Brooke, E J]]
[[Category: Brooke EJ]]
[[Category: Carr, S B]]
[[Category: Carr SB]]
[[Category: Evans, R M]]
[[Category: Evans RM]]
[[Category: Nomerotskaia, E]]
[[Category: Nomerotskaia E]]
[[Category: Philips, S E.V]]
[[Category: Philips SEV]]
[[Category: Sergent, F]]
[[Category: Sergent F]]
[[Category: Wehlin, S A.M]]
[[Category: Wehlin SAM]]
[[Category: Catalysis]]
[[Category: Fes cluster]]
[[Category: Hydrogen activation]]
[[Category: Nife hydrogenase]]
[[Category: Oxidoreductase]]
[[Category: Transmembrane domain]]

Revision as of 04:39, 25 May 2023

Mechanism of Hydrogen activation by NiFe-hydrogenases

5a4m, resolution 1.70Å

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