5lg7: Difference between revisions

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==Solution NMR structure of Tryptophan to Arginine mutant of Arkadia RING domain==
==Solution NMR structure of Tryptophan to Arginine mutant of Arkadia RING domain==
<StructureSection load='5lg7' size='340' side='right'caption='[[5lg7]], [[NMR_Ensembles_of_Models | 31 NMR models]]' scene=''>
<StructureSection load='5lg7' size='340' side='right'caption='[[5lg7]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5lg7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LG7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LG7 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5lg7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LG7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LG7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2kiz|2kiz]], [[5lg0|5lg0]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lg7 OCA], [https://pdbe.org/5lg7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lg7 RCSB], [https://www.ebi.ac.uk/pdbsum/5lg7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lg7 ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RNF111 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lg7 OCA], [http://pdbe.org/5lg7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lg7 RCSB], [http://www.ebi.ac.uk/pdbsum/5lg7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lg7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RN111_HUMAN RN111_HUMAN]] Acts in the NODAL pathway of mesoderm patterning during embryonic development. Acts downstream AXIN1 as an E3 ubiquitin-protein ligase which promotes the ubiquitination of inhibitory SMADs such as SMAD7, induces their proteasomal degradation and thereby enhances the transcriptional activity of TGF-beta and BMP. Activates Smad3/Smad4-dependent transcription by triggering signal-induced SnoN degradation. Associates with UBE2D2 as an E2 enzyme.<ref>PMID:14657019</ref> <ref>PMID:16601693</ref> <ref>PMID:17591695</ref> <ref>PMID:22411132</ref>
[https://www.uniprot.org/uniprot/RN111_HUMAN RN111_HUMAN] Acts in the NODAL pathway of mesoderm patterning during embryonic development. Acts downstream AXIN1 as an E3 ubiquitin-protein ligase which promotes the ubiquitination of inhibitory SMADs such as SMAD7, induces their proteasomal degradation and thereby enhances the transcriptional activity of TGF-beta and BMP. Activates Smad3/Smad4-dependent transcription by triggering signal-induced SnoN degradation. Associates with UBE2D2 as an E2 enzyme.<ref>PMID:14657019</ref> <ref>PMID:16601693</ref> <ref>PMID:17591695</ref> <ref>PMID:22411132</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Ubiquitin protein ligase|Ubiquitin protein ligase]]
*[[Ubiquitin protein ligase 3D structures|Ubiquitin protein ligase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bentrop, D]]
[[Category: Bentrop D]]
[[Category: Birkou, M]]
[[Category: Birkou M]]
[[Category: Chasapis, C T]]
[[Category: Chasapis CT]]
[[Category: Episkopou, V]]
[[Category: Episkopou V]]
[[Category: Herrmann, T]]
[[Category: Herrmann T]]
[[Category: Lelli, M]]
[[Category: Lelli M]]
[[Category: Loutsidou, A K]]
[[Category: Loutsidou AK]]
[[Category: Spyroulias, G A]]
[[Category: Spyroulias GA]]
[[Category: Arkadia]]
[[Category: E2 enzyme]]
[[Category: E3 ubiquitin ligase]]
[[Category: Ligase]]
[[Category: Ring domain]]
[[Category: Rnf111]]
[[Category: Tgf-b]]
[[Category: Tryptophan]]
[[Category: Ubch5b]]