6n68: Difference between revisions

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==NMR solution structure of Protonectin (Agelaia pallipes pallipes) interacting with SDS micelles: an antimicrobial peptide with anticancer activity on breast cancer cells==
==NMR solution structure of Protonectin (Agelaia pallipes pallipes) interacting with SDS micelles: an antimicrobial peptide with anticancer activity on breast cancer cells==
<StructureSection load='6n68' size='340' side='right'caption='[[6n68]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='6n68' size='340' side='right'caption='[[6n68]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6n68]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6N68 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6N68 FirstGlance]. <br>
<table><tr><td colspan='2'>[[6n68]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agelaia_pallipes Agelaia pallipes]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6N68 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6N68 FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6n68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6n68 OCA], [https://pdbe.org/6n68 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6n68 RCSB], [https://www.ebi.ac.uk/pdbsum/6n68 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6n68 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6n68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6n68 OCA], [https://pdbe.org/6n68 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6n68 RCSB], [https://www.ebi.ac.uk/pdbsum/6n68 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6n68 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/PROTO_AGEPP PROTO_AGEPP]] Shows potent antimicrobial action against both Gram-positive and Gram-negative bacteria (MIC=25 ug/ml or 32-63 uM against E.coli, MIC=1.7 ug/ml against P.aeruginosa, MIC=3.1 ug/ml or 4 uM against B.subtilis, MIC=8 uM against S.epidermis, and MIC=12.5 ug/ml or 8 uM against S.aureus) (PubMed:15225564, PubMed:23836163). Acts by disrupting the integrity of the outer and inner bacterial membranes (Probable). Adopts an amphipathic alpha helical conformation in membrane that is essential for the membrane disrupting activity (PubMed:23836163). Mast cell degranulator that induces a potent chemotaxis in polymorphonucleated leukocyte (PMNL) cells (PubMed:15052574, PubMed:15225564). Shows no or weak hemolytic activity (PubMed:15052574, PubMed:15225564).<ref>PMID:15052574</ref> <ref>PMID:15225564</ref> <ref>PMID:23836163</ref> <ref>PMID:23836163</ref>
[https://www.uniprot.org/uniprot/PROTO_AGEPP PROTO_AGEPP] Shows potent antimicrobial action against both Gram-positive and Gram-negative bacteria (MIC=25 ug/ml or 32-63 uM against E.coli, MIC=1.7 ug/ml against P.aeruginosa, MIC=3.1 ug/ml or 4 uM against B.subtilis, MIC=8 uM against S.epidermis, and MIC=12.5 ug/ml or 8 uM against S.aureus) (PubMed:15225564, PubMed:23836163). Acts by disrupting the integrity of the outer and inner bacterial membranes (Probable). Adopts an amphipathic alpha helical conformation in membrane that is essential for the membrane disrupting activity (PubMed:23836163). Mast cell degranulator that induces a potent chemotaxis in polymorphonucleated leukocyte (PMNL) cells (PubMed:15052574, PubMed:15225564). Shows no or weak hemolytic activity (PubMed:15052574, PubMed:15225564).<ref>PMID:15052574</ref> <ref>PMID:15225564</ref> <ref>PMID:23836163</ref> <ref>PMID:23836163</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agelaia pallipes]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Cabrera, M P.Dos Santos]]
[[Category: Dos Santos Cabrera MP]]
[[Category: Fadel, V]]
[[Category: Fadel V]]
[[Category: Martins, D B]]
[[Category: Martins DB]]
[[Category: Anticancer activity]]
[[Category: Antitumor protein]]
[[Category: Peptide membrane interaction]]
[[Category: Protonectin aggregation surface interaction]]