6xti: Difference between revisions

Revision as of 11:07, 14 June 2023

NMR solution structure of class IV lasso peptide felipeptin A2 from Amycolatopsis sp. YIM10

Structural highlights

6xti is a 1 chain structure with sequence from Amycolatopsis sp.. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A5P9PSL4_9PSEU

Publication Abstract from PubMed

Heterologous expression of a biosynthesis gene cluster from Amycolatopsis sp. resulted in the discovery of two unique class IV lasso peptides, felipeptins A1 and A2. A mixture of felipeptins stimulated proliferation of cancer cells, while having no such effect on the normal cells. Detailed investigation revealed, that pre-treatment of cancer cells with a mixture of felipeptins resulted in downregulation of the tumor suppressor Rb, making the cancer cells to proliferate faster. Pre-treatment with felipeptins made cancer cells considerably more sensitive to the anticancer agent doxorubicin and re-sensitized doxorubicin-resistant cells to this drug. Structural characterization and binding experiments showed an interaction between felipeptins resulting in complex formation, which explains their synergistic effect. This discovery may open an alternative avenue in cancer treatment, helping to eliminate quiescent cells that often lead to cancer relapse.

Class IV Lasso Peptides Synergistically Induce Proliferation of Cancer Cells and Sensitize Them to Doxorubicin.,Guerrero-Garzon JF, Madland E, Zehl M, Singh M, Rezaei S, Aachmann FL, Courtade G, Urban E, Ruckert C, Busche T, Kalinowski J, Cao YR, Jiang Y, Jiang CL, Selivanova G, Zotchev SB iScience. 2020 Nov 10;23(12):101785. doi: 10.1016/j.isci.2020.101785. eCollection, 2020 Dec 18. PMID:33294793^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Guerrero-Garzon JF, Madland E, Zehl M, Singh M, Rezaei S, Aachmann FL, Courtade G, Urban E, Ruckert C, Busche T, Kalinowski J, Cao YR, Jiang Y, Jiang CL, Selivanova G, Zotchev SB. Class IV Lasso Peptides Synergistically Induce Proliferation of Cancer Cells and Sensitize Them to Doxorubicin. iScience. 2020 Nov 10;23(12):101785. doi: 10.1016/j.isci.2020.101785. eCollection, 2020 Dec 18. PMID:33294793 doi:https://dx.doi.org/10.1016/j.isci.2020.101785

Proteopedia Page Contributors and Editors (what is this?)

OCA

[1] Guerrero-Garzon JF, Madland E, Zehl M, Singh M, Rezaei S, Aachmann FL, Courtade G, Urban E, Ruckert C, Busche T, Kalinowski J, Cao YR, Jiang Y, Jiang CL, Selivanova G, Zotchev SB. Class IV Lasso Peptides Synergistically Induce Proliferation of Cancer Cells and Sensitize Them to Doxorubicin. iScience. 2020 Nov 10;23(12):101785. doi: 10.1016/j.isci.2020.101785. eCollection, 2020 Dec 18. PMID:33294793 doi:https://dx.doi.org/10.1016/j.isci.2020.101785

[1]

@@ Line 1: / Line 1: @@
 ==NMR solution structure of class IV lasso peptide felipeptin A2 from Amycolatopsis sp. YIM10==
-<StructureSection load='6xti' size='340' side='right'caption='[[6xti]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='6xti' size='340' side='right'caption='[[6xti]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6xti]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Amycolatopsis_sp. Amycolatopsis sp.]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XTI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6XTI FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6xti]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Amycolatopsis_sp. Amycolatopsis sp.]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XTI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XTI FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6xth|6xth]]</div></td></tr>
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xti OCA], [https://pdbe.org/6xti PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xti RCSB], [https://www.ebi.ac.uk/pdbsum/6xti PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xti ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6xti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xti OCA], [http://pdbe.org/6xti PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6xti RCSB], [http://www.ebi.ac.uk/pdbsum/6xti PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6xti ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/A0A5P9PSL4_9PSEU A0A5P9PSL4_9PSEU]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 22: / Line 23: @@
 [[Category: Amycolatopsis sp]]
 [[Category: Large Structures]]
-[[Category: Aachmann, F L]]
+[[Category: Aachmann FL]]
-[[Category: Courtade, G]]
+[[Category: Courtade G]]
-[[Category: Guerrero-Garzon, J F]]
+[[Category: Guerrero-Garzon JF]]
-[[Category: Madland, E]]
+[[Category: Madland E]]
-[[Category: Zotchev, S B]]
+[[Category: Zotchev SB]]
-[[Category: Antibacterial]]
-[[Category: Class iv]]
-[[Category: Lasso peptide]]
-[[Category: Unknown function]]

6xti: Difference between revisions

Revision as of 11:07, 14 June 2023

NMR solution structure of class IV lasso peptide felipeptin A2 from Amycolatopsis sp. YIM10

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools