5dc2: Difference between revisions

<table><tr><td colspan='2'>[[5dc2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_CDC1551 Mycobacterium tuberculosis CDC1551]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DC2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DC2 FirstGlance]. <br>

</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=58U:(4S)-4-METHYL-2,5,7-TRIOXOHEPTANOIC+ACID'>58U</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>

<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dc2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dc2 OCA], [https://pdbe.org/5dc2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dc2 RCSB], [https://www.ebi.ac.uk/pdbsum/5dc2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dc2 ProSAT]</span></td></tr>

[https://www.uniprot.org/uniprot/LDT2_MYCTU LDT2_MYCTU] Generates 3->3 cross-links in peptidoglycan, catalyzing the cleavage of the mDap(3)-D-Ala(4) bond of a tetrapeptide donor stem and the formation of a bond between the carbonyl of mDap(3) of the donor stem and the side chain of mDap(3) of the acceptor stem. Is specific for donor substrates containing a stem tetrapeptide since it cannot use pentapeptide stems.<ref>PMID:24041897</ref>  

[[Category: Mycobacterium tuberculosis CDC1551]]

[[Category: Basta L]]

[[Category: Bianchet MA]]

[[Category: Lamichhane G]]

[[Category: Pan Y]]