4lmq: Difference between revisions
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<StructureSection load='4lmq' size='340' side='right'caption='[[4lmq]], [[Resolution|resolution]] 2.77Å' scene=''> | <StructureSection load='4lmq' size='340' side='right'caption='[[4lmq]], [[Resolution|resolution]] 2.77Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4lmq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[4lmq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LMQ FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.773Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lmq OCA], [https://pdbe.org/4lmq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lmq RCSB], [https://www.ebi.ac.uk/pdbsum/4lmq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lmq ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lmq OCA], [https://pdbe.org/4lmq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lmq RCSB], [https://www.ebi.ac.uk/pdbsum/4lmq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lmq ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/SDF1_HUMAN SDF1_HUMAN] Chemoattractant active on T-lymphocytes, monocytes, but not neutrophils. Activates the C-X-C chemokine receptor CXCR4 to induce a rapid and transient rise in the level of intracellular calcium ions and chemotaxis. Also binds to another C-X-C chemokine receptor CXCR7, which activates the beta-arrestin pathway and acts as a scavenger receptor for SDF-1. SDF-1-beta(3-72) and SDF-1-alpha(3-67) show a reduced chemotactic activity. Binding to cell surface proteoglycans seems to inhibit formation of SDF-1-alpha(3-67) and thus to preserve activity on local sites. Acts as a positive regulator of monocyte migration and a negative regulator of monocyte adhesion via the LYN kinase. Stimulates migration of monocytes and T-lymphocytes through its receptors, CXCR4 and CXCR7, and decreases monocyte adherence to surfaces coated with ICAM-1, a ligand for beta-2 integrins. SDF1A/CXCR4 signaling axis inhibits beta-2 integrin LFA-1 mediated adhesion of monocytes to ICAM-1 through LYN kinase. Inhibits CXCR4-mediated infection by T-cell line-adapted HIV-1. Plays a protective role after myocardial infarction. Induces down-regulation and internalization of CXCR7 expressed in various cells. Has several critical functions during embryonic development; required for B-cell lymphopoiesis, myelopoiesis in bone marrow and heart ventricular septum formation.<ref>PMID:8752281</ref> <ref>PMID:11069075</ref> <ref>PMID:11859124</ref> <ref>PMID:16107333</ref> <ref>PMID:18802065</ref> <ref>PMID:19255243</ref> | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Adams | [[Category: Adams C]] | ||
[[Category: Barck | [[Category: Barck K]] | ||
[[Category: Carano | [[Category: Carano RD]] | ||
[[Category: Chiang | [[Category: Chiang NY]] | ||
[[Category: Clark | [[Category: Clark R]] | ||
[[Category: Clark | [[Category: Clark S]] | ||
[[Category: Coons | [[Category: Coons M]] | ||
[[Category: Corpuz | [[Category: Corpuz R]] | ||
[[Category: Damico-Beyer | [[Category: Damico-Beyer LA]] | ||
[[Category: Ferrara | [[Category: Ferrara N]] | ||
[[Category: Gribling | [[Category: Gribling P]] | ||
[[Category: Kelley | [[Category: Kelley RF]] | ||
[[Category: Lee | [[Category: Lee WP]] | ||
[[Category: Li | [[Category: Li B]] | ||
[[Category: Quintana | [[Category: Quintana L]] | ||
[[Category: Suto | [[Category: Suto E]] | ||
[[Category: Takkar | [[Category: Takkar R]] | ||
[[Category: Ultsch | [[Category: Ultsch M]] | ||
[[Category: Wang | [[Category: Wang J]] | ||
[[Category: Wang | [[Category: Wang W]] | ||
[[Category: Wong | [[Category: Wong T]] | ||
[[Category: Xiang | [[Category: Xiang H]] | ||
[[Category: Yao | [[Category: Yao J]] | ||
[[Category: Zhong | [[Category: Zhong Z]] | ||