1t24: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,662 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,662 edits
No edit summary
 
Line 3: Line 3:
<StructureSection load='1t24' size='340' side='right'caption='[[1t24]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='1t24' size='340' side='right'caption='[[1t24]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1t24]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Plafa Plafa]. The June 2008 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Lactate Dehydrogenase''  by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2008_6 10.2210/rcsb_pdb/mom_2008_6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T24 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1T24 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1t24]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. The June 2008 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Lactate Dehydrogenase''  by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2008_6 10.2210/rcsb_pdb/mom_2008_6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T24 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=OXQ:4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC+ACID'>OXQ</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ldg|1ldg]], [[1t25|1t25]], [[1t26|1t26]], [[1t2c|1t2c]], [[1t2d|1t2d]], [[1t2e|1t2e]], [[1t2f|1t2f]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=OXQ:4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC+ACID'>OXQ</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LDH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5833 PLAFA])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t24 OCA], [https://pdbe.org/1t24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t24 RCSB], [https://www.ebi.ac.uk/pdbsum/1t24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t24 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-lactate_dehydrogenase L-lactate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.27 1.1.1.27] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1t24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t24 OCA], [http://pdbe.org/1t24 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1t24 RCSB], [http://www.ebi.ac.uk/pdbsum/1t24 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1t24 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LDH_PLAFD LDH_PLAFD]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: L-lactate dehydrogenase]]
[[Category: Lactate Dehydrogenase]]
[[Category: Lactate Dehydrogenase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Plafa]]
[[Category: Plasmodium falciparum]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Barros, D]]
[[Category: Barros D]]
[[Category: Brady, R L]]
[[Category: Brady RL]]
[[Category: Cameron, A]]
[[Category: Cameron A]]
[[Category: Croft, S L]]
[[Category: Croft SL]]
[[Category: Easton, A]]
[[Category: De Las Heras FG]]
[[Category: Gabarro, R]]
[[Category: Easton A]]
[[Category: Gamo, F J]]
[[Category: Gabarro R]]
[[Category: Garcia-Ochoa, S]]
[[Category: Gamo FJ]]
[[Category: Heras, F G.De Las]]
[[Category: Garcia-Ochoa S]]
[[Category: Kendrick, H]]
[[Category: Kendrick H]]
[[Category: Lavandera, J L]]
[[Category: Lavandera JL]]
[[Category: Leon, L]]
[[Category: Leon L]]
[[Category: Mallo, A]]
[[Category: Mallo A]]
[[Category: Martin, J J]]
[[Category: Martin JJ]]
[[Category: Read, J]]
[[Category: Read J]]
[[Category: Risco, F]]
[[Category: Risco F]]
[[Category: Ruiz, J R]]
[[Category: Ruiz JR]]
[[Category: Sanz, L]]
[[Category: Sanz L]]
[[Category: Sessions, R B]]
[[Category: Sessions RB]]
[[Category: Tranter, R]]
[[Category: Tranter R]]
[[Category: Vivas, L]]
[[Category: Vivas L]]
[[Category: Winter, V J]]
[[Category: Winter VJ]]
[[Category: Oxidoreductase]]
[[Category: Protein-ligand complex]]
Retrieved from "https://proteopedia.org/1t24"