3k4d: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='3k4d' size='340' side='right'caption='[[3k4d]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
<StructureSection load='3k4d' size='340' side='right'caption='[[3k4d]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3k4d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K4D FirstGlance]. <br>
<table><tr><td colspan='2'>[[3k4d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K4D FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EVA:(2S,3R,4S,5R)-3,4,5-TRIHYDROXY-6-OXOPIPERIDINE-2-CARBOXYLIC+ACID'>EVA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.393&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3k46|3k46]], [[3k4a|3k4a]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EVA:(2S,3R,4S,5R)-3,4,5-TRIHYDROXY-6-OXOPIPERIDINE-2-CARBOXYLIC+ACID'>EVA</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b1617, gurA, gusA, JW1609, uidA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-glucuronidase Beta-glucuronidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.31 3.2.1.31] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k4d OCA], [https://pdbe.org/3k4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k4d RCSB], [https://www.ebi.ac.uk/pdbsum/3k4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k4d ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k4d OCA], [https://pdbe.org/3k4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k4d RCSB], [https://www.ebi.ac.uk/pdbsum/3k4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k4d ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/BGLR_ECOLI BGLR_ECOLI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Beta-glucuronidase]]
[[Category: Escherichia coli K-12]]
[[Category: Ecoli]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Redinbo, M R]]
[[Category: Redinbo MR]]
[[Category: Wallace, B D]]
[[Category: Wallace BD]]
[[Category: Alpha/beta barrel]]
[[Category: Beta-sandwich domain]]
[[Category: Glucaro-d-lactam]]
[[Category: Glycosidase]]
[[Category: Glycosyl hydrolase]]
[[Category: Hydrolase]]
[[Category: Hydrolase-hydrolase inhibitor complex]]
[[Category: Sugar-binding domain]]

Latest revision as of 08:08, 6 September 2023

Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound

3k4d, resolution 2.39Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA