3mg2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='3mg2' size='340' side='right'caption='[[3mg2]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
<StructureSection load='3mg2' size='340' side='right'caption='[[3mg2]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3mg2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aphanocapsa_sp._(strain_n-1) Aphanocapsa sp. (strain n-1)]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3i1w 3i1w]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MG2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MG2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3mg2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3i1w 3i1w]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MG2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MG2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ECH:BETA,BETA-CAROTEN-4-ONE'>ECH</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.653&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1m98|1m98]], [[3mg1|3mg1]], [[3mg3|3mg3]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ECH:BETA,BETA-CAROTEN-4-ONE'>ECH</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">slr1963 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mg2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mg2 OCA], [https://pdbe.org/3mg2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mg2 RCSB], [https://www.ebi.ac.uk/pdbsum/3mg2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mg2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mg2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mg2 OCA], [https://pdbe.org/3mg2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mg2 RCSB], [https://www.ebi.ac.uk/pdbsum/3mg2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mg2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/OCP_SYNY3 OCP_SYNY3]] Acts as a photo-protectant. Essential for inhibiting white and blue-green light non-photochemical quenching (NPQ). Binding carotenoids improves OCP's intrinsic photoprotectant activity by broadening its absorption spectrum and facilitating the dissipation of absorbed energy.<ref>PMID:16531492</ref>
[https://www.uniprot.org/uniprot/OCP_SYNY3 OCP_SYNY3] Acts as a photo-protectant. Essential for inhibiting white and blue-green light non-photochemical quenching (NPQ). Binding carotenoids improves OCP's intrinsic photoprotectant activity by broadening its absorption spectrum and facilitating the dissipation of absorbed energy.<ref>PMID:16531492</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 34:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Haen, S D]]
[[Category: Synechocystis sp. PCC 6803]]
[[Category: Kerfeld, C A]]
[[Category: D'Haen S]]
[[Category: Kinney, J]]
[[Category: Kerfeld CA]]
[[Category: Kirilovsky, D]]
[[Category: Kinney J]]
[[Category: Klein, M G]]
[[Category: Kirilovsky D]]
[[Category: Perreau, F]]
[[Category: Klein MG]]
[[Category: Punginelli, C]]
[[Category: Perreau F]]
[[Category: Wilson, A]]
[[Category: Punginelli C]]
[[Category: Zwart, P H]]
[[Category: Wilson A]]
[[Category: Carotenoid binding protein]]
[[Category: Zwart PH]]
[[Category: Echinone]]
[[Category: Phycobilisome]]

Latest revision as of 08:52, 6 September 2023

Crystal structure of the orange carotenoid protein Y44S mutant from cyanobacteria synechocystis sp. PCC 6803

3mg2, resolution 2.65Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA