3oam: Difference between revisions

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==Crystal structure of cytidylyltransferase from Vibrio cholerae==
==Crystal structure of cytidylyltransferase from Vibrio cholerae==
<StructureSection load='3oam' size='340' side='right' caption='[[3oam]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='3oam' size='340' side='right'caption='[[3oam]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3oam]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3OAM FirstGlance]. <br>
<table><tr><td colspan='2'>[[3oam]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OAM FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kdsB, VC1875, VC_1875 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-deoxy-manno-octulosonate_cytidylyltransferase 3-deoxy-manno-octulosonate cytidylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.38 2.7.7.38] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3oam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oam OCA], [https://pdbe.org/3oam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3oam RCSB], [https://www.ebi.ac.uk/pdbsum/3oam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3oam ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3oam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3oam OCA], [http://pdbe.org/3oam PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3oam RCSB], [http://www.ebi.ac.uk/pdbsum/3oam PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3oam ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/KDSB_VIBCH KDSB_VIBCH]] Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity).  
[https://www.uniprot.org/uniprot/KDSB_VIBCH KDSB_VIBCH] Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 3-deoxy-manno-octulosonate cytidylyltransferase]]
[[Category: Large Structures]]
[[Category: Vibch]]
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
[[Category: Borek, D]]
[[Category: Borek D]]
[[Category: Structural genomic]]
[[Category: Grimshaw S]]
[[Category: Grimshaw, S]]
[[Category: Hattne J]]
[[Category: Hattne, J]]
[[Category: Nakka C]]
[[Category: Nakka, C]]
[[Category: Otwinowski Z]]
[[Category: Otwinowski, Z]]
[[Category: Rostankowski R]]
[[Category: Rostankowski, R]]
[[Category: Csgid]]
[[Category: Cytidylyltransferase]]
[[Category: Transferase]]

Latest revision as of 09:32, 6 September 2023

Crystal structure of cytidylyltransferase from Vibrio cholerae

3oam, resolution 1.75Å

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