5j50: Difference between revisions

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<StructureSection load='5j50' size='340' side='right'caption='[[5j50]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='5j50' size='340' side='right'caption='[[5j50]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5j50]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J50 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5J50 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5j50]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Artocarpus_integer Artocarpus integer]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5J50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5J50 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NPO:P-NITROPHENOL'>NPO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ugw|1ugw]], [[1jac|1jac]], [[1kuj|1kuj]], [[1ws5|1ws5]], [[1ws4|1ws4]], [[1uh0|1uh0]], [[1m26|1m26]], [[1ugx|1ugx]], [[1uh1|1uh1]], [[1ugy|1ugy]], [[1ku8|1ku8]], [[4r6n|4r6n]], [[4r6o|4r6o]], [[4r6p|4r6p]], [[4r6q|4r6q]], [[4r6r|4r6r]], [[5j4x|5j4x]], [[5j51|5j51]], [[5j52|5j52]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NPO:P-NITROPHENOL'>NPO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PRD_900084:Thomsen-Friedenreich+antigen'>PRD_900084</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5j50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j50 OCA], [http://pdbe.org/5j50 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5j50 RCSB], [http://www.ebi.ac.uk/pdbsum/5j50 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5j50 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5j50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5j50 OCA], [https://pdbe.org/5j50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5j50 RCSB], [https://www.ebi.ac.uk/pdbsum/5j50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5j50 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/LECA_ARTIN LECA_ARTIN]] D-galactose-specific lectin, binds the T-antigen structure Gal-beta1,3-GalNAc (Thomsen-Friedenreich-antigen-specific lectin). Potent and selective stimulant of distinct T- and B-cell functions. Shows a unique ability to specifically recognize IgA-1 from human serum. [[http://www.uniprot.org/uniprot/LECB3_ARTIN LECB3_ARTIN]] D-galactose-specific lectin, binds the T-antigen structure Gal-beta1,3-GalNAc (Thomsen-Friedenreich-antigen-specific lectin). Potent and selective stimulant of distinct T- and B-cell functions. Shows a unique ability to specifically recognize IgA-1 from human serum.  
[https://www.uniprot.org/uniprot/LECA_ARTIN LECA_ARTIN] D-galactose-specific lectin, binds the T-antigen structure Gal-beta1,3-GalNAc (Thomsen-Friedenreich-antigen-specific lectin). Potent and selective stimulant of distinct T- and B-cell functions. Shows a unique ability to specifically recognize IgA-1 from human serum.


==See Also==
==See Also==
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[[Category: Artocarpus integer]]
[[Category: Artocarpus integer]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Abhinav, K V]]
[[Category: Abhinav KV]]
[[Category: Sharma, K]]
[[Category: Sharma K]]
[[Category: Surolia, A]]
[[Category: Surolia A]]
[[Category: Vijayan, M]]
[[Category: Vijayan M]]
[[Category: Beta-prism i fold]]
[[Category: Galactose specific lectin]]
[[Category: Plant lectin]]
[[Category: Post translational proteolysis]]
[[Category: Reducing and non-reducing sugar]]
[[Category: Sugar binding protein]]
[[Category: T-antigen binding protein]]

Latest revision as of 10:48, 6 September 2023

Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP

5j50, resolution 2.05Å

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