5k8j: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
Line 1: Line 1:


==Structure of Caulobacter crescentus VapBC1 (apo form)==
==Structure of Caulobacter crescentus VapBC1 (apo form)==
<StructureSection load='5k8j' size='340' side='right' caption='[[5k8j]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='5k8j' size='340' side='right'caption='[[5k8j]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5k8j]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Caucr Caucr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K8J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5K8J FirstGlance]. <br>
<table><tr><td colspan='2'>[[5k8j]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Caulobacter_vibrioides_CB15 Caulobacter vibrioides CB15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K8J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5K8J FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5l6l|5l6l]], [[5l6m|5l6m]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5k8j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k8j OCA], [https://pdbe.org/5k8j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5k8j RCSB], [https://www.ebi.ac.uk/pdbsum/5k8j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5k8j ProSAT]</span></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CC_0032 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190650 CAUCR]), vapC, CC_0031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190650 CAUCR])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5k8j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k8j OCA], [http://pdbe.org/5k8j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5k8j RCSB], [http://www.ebi.ac.uk/pdbsum/5k8j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5k8j ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q9AC35_CAUCR Q9AC35_CAUCR]] Toxic component of a toxin-antitoxin (TA) module. An RNase.[HAMAP-Rule:MF_00265]  
[https://www.uniprot.org/uniprot/Q9AC34_CAUVC Q9AC34_CAUVC]  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 19:
</div>
</div>
<div class="pdbe-citations 5k8j" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5k8j" style="background-color:#fffaf0;"></div>
==See Also==
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Caucr]]
[[Category: Caulobacter vibrioides CB15]]
[[Category: Bendtsen, K L]]
[[Category: Large Structures]]
[[Category: Brodersen, D E]]
[[Category: Bendtsen KL]]
[[Category: Luckmann, M]]
[[Category: Brodersen DE]]
[[Category: Xu, K]]
[[Category: Luckmann M]]
[[Category: Dna-binding]]
[[Category: Xu K]]
[[Category: Hydrolase]]
[[Category: Pin domain]]
[[Category: Ribonuclease]]
[[Category: Toxin-antitoxin]]
Retrieved from "https://proteopedia.org/5k8j"