5l7p: Difference between revisions
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<StructureSection load='5l7p' size='340' side='right'caption='[[5l7p]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='5l7p' size='340' side='right'caption='[[5l7p]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5l7p]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L7P OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[5l7p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5L7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5L7P FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=BUU:(2~{S})-2-azanyl-3-[3-[(2-nitrophenyl)methoxy]-4-oxidanyl-phenyl]propanoic+acid'>BUU</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=BUU:(2~{S})-2-azanyl-3-[3-[(2-nitrophenyl)methoxy]-4-oxidanyl-phenyl]propanoic+acid'>BUU</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5l7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5l7p OCA], [https://pdbe.org/5l7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5l7p RCSB], [https://www.ebi.ac.uk/pdbsum/5l7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5l7p ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/SYY_METJA SYY_METJA] Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).<ref>PMID:10585437</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: | [[Category: Methanocaldococcus jannaschii DSM 2661]] | ||
[[Category: Baumann | [[Category: Baumann T]] | ||
[[Category: Budisa | [[Category: Budisa N]] | ||
[[Category: Dobbek | [[Category: Dobbek H]] | ||
[[Category: Durkin | [[Category: Durkin P]] | ||
[[Category: Hauf | [[Category: Hauf M]] | ||
[[Category: Martins | [[Category: Martins BM]] | ||
[[Category: Moeglich | [[Category: Moeglich A]] | ||
[[Category: Richter | [[Category: Richter F]] | ||
[[Category: Schneider | [[Category: Schneider T]] | ||
Latest revision as of 16:10, 4 October 2023
In silico-powered specific incorporation of photocaged Dopa at multiple protein sites
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