6dgd: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
Line 3: Line 3:
<StructureSection load='6dgd' size='340' side='right'caption='[[6dgd]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
<StructureSection load='6dgd' size='340' side='right'caption='[[6dgd]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6dgd]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DGD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DGD FirstGlance]. <br>
<table><tr><td colspan='2'>[[6dgd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DGD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DGD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.823&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6dcr|6dcr]], [[4nl4|4nl4]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">priA, B1727_25905, CPT10_21250, SAMEA3304003_04572 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6dgd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dgd OCA], [https://pdbe.org/6dgd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6dgd RCSB], [https://www.ebi.ac.uk/pdbsum/6dgd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6dgd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6dgd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6dgd OCA], [http://pdbe.org/6dgd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6dgd RCSB], [http://www.ebi.ac.uk/pdbsum/6dgd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6dgd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/A0A1W2ITH4_KLEPN A0A1W2ITH4_KLEPN]] Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA.[HAMAP-Rule:MF_00983]  
[https://www.uniprot.org/uniprot/A0A1W2ITH4_KLEPN A0A1W2ITH4_KLEPN] Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA.[HAMAP-Rule:MF_00983]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 6dgd" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6dgd" style="background-color:#fffaf0;"></div>
==See Also==
*[[Helicase 3D structures|Helicase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Klebsiella pneumoniae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Keck, J L]]
[[Category: Synthetic construct]]
[[Category: Satyshur, K A]]
[[Category: Keck JL]]
[[Category: Windgassen, T A]]
[[Category: Satyshur KA]]
[[Category: Dna binding protein]]
[[Category: Windgassen TA]]
[[Category: Dna binding protein-dna complex]]
[[Category: Dna replication fork binding]]
[[Category: Dna replication restart]]
[[Category: Dsdna]]
[[Category: Leading arm]]
[[Category: Pria helicase]]

Latest revision as of 06:05, 11 October 2023

PriA helicase bound to dsDNA of a DNA replication fork

6dgd, resolution 2.82Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=6dgd&oldid=3900609"