6v08: Difference between revisions

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<StructureSection load='6v08' size='340' side='right'caption='[[6v08]], [[Resolution|resolution]] 2.58&Aring;' scene=''>
<StructureSection load='6v08' size='340' side='right'caption='[[6v08]], [[Resolution|resolution]] 2.58&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6v08]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V08 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V08 FirstGlance]. <br>
<table><tr><td colspan='2'>[[6v08]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V08 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6V08 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.58&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1c1z|1c1z]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">APOH, B2G1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6v08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v08 OCA], [https://pdbe.org/6v08 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6v08 RCSB], [https://www.ebi.ac.uk/pdbsum/6v08 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6v08 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v08 OCA], [http://pdbe.org/6v08 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v08 RCSB], [http://www.ebi.ac.uk/pdbsum/6v08 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v08 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/APOH_HUMAN APOH_HUMAN]] Binds to various kinds of negatively charged substances such as heparin, phospholipids, and dextran sulfate. May prevent activation of the intrinsic blood coagulation cascade by binding to phospholipids on the surface of damaged cells.  
[https://www.uniprot.org/uniprot/APOH_HUMAN APOH_HUMAN] Binds to various kinds of negatively charged substances such as heparin, phospholipids, and dextran sulfate. May prevent activation of the intrinsic blood coagulation cascade by binding to phospholipids on the surface of damaged cells.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chen, Z]]
[[Category: Chen Z]]
[[Category: Chinnaraj, M]]
[[Category: Chinnaraj M]]
[[Category: Macor, P]]
[[Category: Macor P]]
[[Category: Pengo, V]]
[[Category: Pengo V]]
[[Category: Planer, W]]
[[Category: Planer W]]
[[Category: Pozzi, N]]
[[Category: Pozzi N]]
[[Category: Ruben, E A]]
[[Category: Ruben EA]]
[[Category: Tedesco, F]]
[[Category: Tedesco F]]
[[Category: Zuo, X]]
[[Category: Zuo X]]
[[Category: Autoimmunity]]
[[Category: Blood clotting]]
[[Category: Coagulation]]
[[Category: Innate immune system]]
[[Category: Plasma glycoprotein]]
[[Category: Sushi domain]]
[[Category: Thrombosis]]

Latest revision as of 08:01, 11 October 2023

Crystal structure of human recombinant Beta-2 glycoprotein I (hrB2GPI)

6v08, resolution 2.58Å

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