6vdc: Difference between revisions

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<StructureSection load='6vdc' size='340' side='right'caption='[[6vdc]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='6vdc' size='340' side='right'caption='[[6vdc]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6vdc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_smegmatis"_trevisan_1889 "bacillus smegmatis" trevisan 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VDC OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VDC FirstGlance]. <br>
<table><tr><td colspan='2'>[[6vdc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis Mycolicibacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VDC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VDC FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.402&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">polA, MSMEI_3749 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1772 "Bacillus smegmatis" Trevisan 1889])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vdc OCA], [https://pdbe.org/6vdc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vdc RCSB], [https://www.ebi.ac.uk/pdbsum/6vdc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vdc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vdc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vdc OCA], [http://pdbe.org/6vdc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vdc RCSB], [http://www.ebi.ac.uk/pdbsum/6vdc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vdc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/I7G3P9_MYCS2 I7G3P9_MYCS2]] In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.[RuleBase:RU004460]  
[https://www.uniprot.org/uniprot/A0QYZ2_MYCS2 A0QYZ2_MYCS2] In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.[RuleBase:RU004460]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6vdc" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6vdc" style="background-color:#fffaf0;"></div>
==See Also==
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus smegmatis trevisan 1889]]
[[Category: DNA-directed DNA polymerase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Ghosh, S]]
[[Category: Mycolicibacterium smegmatis]]
[[Category: Goldgur, Y]]
[[Category: Ghosh S]]
[[Category: Shuman, S]]
[[Category: Goldgur Y]]
[[Category: Apoenzyme]]
[[Category: Shuman S]]
[[Category: Dna polymerase]]
[[Category: Mycobacteria]]
[[Category: Transferase]]
Retrieved from "https://proteopedia.org/6vdc"