5ltr: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 3: Line 3:
<StructureSection load='5ltr' size='340' side='right'caption='[[5ltr]], [[Resolution|resolution]] 1.21&Aring;' scene=''>
<StructureSection load='5ltr' size='340' side='right'caption='[[5ltr]], [[Resolution|resolution]] 1.21&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5ltr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Amphioxus_lanceolatum Amphioxus lanceolatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LTR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5LTR FirstGlance]. <br>
<table><tr><td colspan='2'>[[5ltr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Branchiostoma_lanceolatum Branchiostoma lanceolatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LTR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LTR FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.21&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">blFP-Y3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7740 Amphioxus lanceolatum])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ltr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ltr OCA], [https://pdbe.org/5ltr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ltr RCSB], [https://www.ebi.ac.uk/pdbsum/5ltr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ltr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ltr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ltr OCA], [http://pdbe.org/5ltr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ltr RCSB], [http://www.ebi.ac.uk/pdbsum/5ltr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ltr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/B1PNC0_BRALA B1PNC0_BRALA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Amphioxus lanceolatum]]
[[Category: Branchiostoma lanceolatum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Clavel, D]]
[[Category: Clavel D]]
[[Category: Gotthard, G]]
[[Category: Gotthard G]]
[[Category: Royant, A]]
[[Category: Royant A]]
[[Category: Fluorescent protein]]

Latest revision as of 18:49, 18 October 2023

Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the near physiological pH 8.0

5ltr, resolution 1.21Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA