8h5a: Difference between revisions
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==Crystal structure of YhaJ effector binding domain (ligand-bound)== | |||
<StructureSection load='8h5a' size='340' side='right'caption='[[8h5a]], [[Resolution|resolution]] 2.80Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[8h5a]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8H5A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8H5A FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.803Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7DV:2-methylbenzene-1,4-diol'>7DV</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8h5a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8h5a OCA], [https://pdbe.org/8h5a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8h5a RCSB], [https://www.ebi.ac.uk/pdbsum/8h5a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8h5a ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/YHAJ_ECO57 YHAJ_ECO57] Positive regulator partially required for expression of genes in the locus of effacement (LEE) large pathogenicity island (PAI). Also partially responsible for expression of neighboring gene dlsT (yhaO) during late exponential growth. Binds to DNA of promoter 1 in LEE and DNA from the dlsT promoter region.<ref>PMID:26727373</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Escherichia coli]] | |||
[[Category: Large Structures]] | |||
[[Category: Kim M]] | |||
[[Category: Ryu SE]] | |||
Revision as of 07:04, 25 October 2023
Crystal structure of YhaJ effector binding domain (ligand-bound)
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