2dy3: Difference between revisions

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<StructureSection load='2dy3' size='340' side='right'caption='[[2dy3]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2dy3' size='340' side='right'caption='[[2dy3]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2dy3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_glutamicus"_kinoshita_et_al._1958 "micrococcus glutamicus" kinoshita et al. 1958]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DY3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DY3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2dy3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DY3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DY3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">alr ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1718 "Micrococcus glutamicus" Kinoshita et al. 1958])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alanine_racemase Alanine racemase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.1.1 5.1.1.1] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dy3 OCA], [https://pdbe.org/2dy3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dy3 RCSB], [https://www.ebi.ac.uk/pdbsum/2dy3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dy3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dy3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dy3 OCA], [https://pdbe.org/2dy3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dy3 RCSB], [https://www.ebi.ac.uk/pdbsum/2dy3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dy3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/ALR_CORGL ALR_CORGL]] Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids (By similarity).[HAMAP-Rule:MF_01201]  
[https://www.uniprot.org/uniprot/ALR_CORGL ALR_CORGL] Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids (By similarity).[HAMAP-Rule:MF_01201]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Micrococcus glutamicus kinoshita et al. 1958]]
[[Category: Corynebacterium glutamicum]]
[[Category: Alanine racemase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Kato, R]]
[[Category: Kato R]]
[[Category: Miyaguchi, I]]
[[Category: Miyaguchi I]]
[[Category: Oikawa, T]]
[[Category: Oikawa T]]
[[Category: Sasaki, C]]
[[Category: Sasaki C]]
[[Category: Sugio, S]]
[[Category: Sugio S]]
[[Category: Alpha/beta barrel]]
[[Category: Isomerase]]

Latest revision as of 08:32, 25 October 2023

Crystal Structure of alanine racemase from Corynebacterium glutamicum

2dy3, resolution 2.10Å

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