3tka: Difference between revisions

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<StructureSection load='3tka' size='340' side='right'caption='[[3tka]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
<StructureSection load='3tka' size='340' side='right'caption='[[3tka]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3tka]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TKA FirstGlance]. <br>
<table><tr><td colspan='2'>[[3tka]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TKA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CTN:4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE'>CTN</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rsmH, mraW, yabC, b0082, JW0080 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CTN:4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE'>CTN</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/16S_rRNA_(cytosine(1402)-N(4))-methyltransferase 16S rRNA (cytosine(1402)-N(4))-methyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.199 2.1.1.199] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tka OCA], [https://pdbe.org/3tka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tka RCSB], [https://www.ebi.ac.uk/pdbsum/3tka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tka ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tka OCA], [https://pdbe.org/3tka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tka RCSB], [https://www.ebi.ac.uk/pdbsum/3tka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tka ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/RSMH_ECOLI RSMH_ECOLI]] Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. In vitro, active on the assembled 30S subunit, but not naked 16S rRNA or 70S ribosomes.<ref>PMID:10572301</ref> <ref>PMID:19965768</ref>
[https://www.uniprot.org/uniprot/RSMH_ECOLI RSMH_ECOLI] Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. In vitro, active on the assembled 30S subunit, but not naked 16S rRNA or 70S ribosomes.<ref>PMID:10572301</ref> <ref>PMID:19965768</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Ecoli]]
[[Category: Escherichia coli K-12]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Dong, Y H]]
[[Category: Dong YH]]
[[Category: Gao, Z Q]]
[[Category: Gao ZQ]]
[[Category: Wei, Y]]
[[Category: Wei Y]]
[[Category: Zhang, H]]
[[Category: Zhang H]]
[[Category: Methyl transferase]]
[[Category: Transferase]]
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