5myd: Difference between revisions

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<StructureSection load='5myd' size='340' side='right'caption='[[5myd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='5myd' size='340' side='right'caption='[[5myd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5myd]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MYD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MYD FirstGlance]. <br>
<table><tr><td colspan='2'>[[5myd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_sp._HMSC068C09 Staphylococcus sp. HMSC068C09]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MYD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/dUTP_diphosphatase dUTP diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.23 3.6.1.23] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5myd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5myd OCA], [http://pdbe.org/5myd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5myd RCSB], [http://www.ebi.ac.uk/pdbsum/5myd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5myd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5myd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5myd OCA], [https://pdbe.org/5myd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5myd RCSB], [https://www.ebi.ac.uk/pdbsum/5myd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5myd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A2D0TC86_9STAP A0A2D0TC86_9STAP]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: DUTP diphosphatase]]
[[Category: Staphylococcus sp. HMSC068C09]]
[[Category: Alite, C]]
[[Category: Alite C]]
[[Category: Bowring, J]]
[[Category: Bowring J]]
[[Category: Ciges-Tomas, J R]]
[[Category: Ciges-Tomas JR]]
[[Category: Donderis, J]]
[[Category: Donderis J]]
[[Category: Maiques, E]]
[[Category: Maiques E]]
[[Category: Marina, A]]
[[Category: Marina A]]
[[Category: Mehmedov, I]]
[[Category: Mehmedov I]]
[[Category: Penades, J R]]
[[Category: Penades JR]]
[[Category: Tormo-Mas, M A]]
[[Category: Tormo-Mas MA]]
[[Category: Dutpase]]
[[Category: Gene transfer]]
[[Category: Hydrolase]]
[[Category: Mobile genetic element]]
[[Category: Pathogenicity island]]
[[Category: Sapi]]
[[Category: Signalling]]
[[Category: Staphylococcus aureus]]

Latest revision as of 17:53, 8 November 2023

Convergent evolution involving dimeric and trimeric dUTPases in signalling.

5myd, resolution 2.30Å

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