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==Crystal structure of family 47 alpha-1,2-mannosidase from Caulobacter K31 strain in complex with kifunensine==
==Crystal structure of family 47 alpha-1,2-mannosidase from Caulobacter K31 strain in complex with kifunensine==
<StructureSection load='5ne5' size='340' side='right' caption='[[5ne5]], [[Resolution|resolution]] 1.05&Aring;' scene=''>
<StructureSection load='5ne5' size='340' side='right'caption='[[5ne5]], [[Resolution|resolution]] 1.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5ne5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Causk Causk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NE5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NE5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5ne5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caulobacter_sp._K31 Caulobacter sp. K31]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NE5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NE5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=KIF:KIFUNENSINE'>KIF</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.05&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Caul_4035 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=366602 CAUSK])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=KIF:KIFUNENSINE'>KIF</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-oligosaccharide_1,2-alpha-mannosidase Mannosyl-oligosaccharide 1,2-alpha-mannosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.113 3.2.1.113] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ne5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ne5 OCA], [https://pdbe.org/5ne5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ne5 RCSB], [https://www.ebi.ac.uk/pdbsum/5ne5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ne5 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ne5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ne5 OCA], [http://pdbe.org/5ne5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ne5 RCSB], [http://www.ebi.ac.uk/pdbsum/5ne5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ne5 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/B0SWV2_CAUSK B0SWV2_CAUSK]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5ne5" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5ne5" style="background-color:#fffaf0;"></div>
==See Also==
*[[Mannosidase 3D structures|Mannosidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Causk]]
[[Category: Caulobacter sp. K31]]
[[Category: Mannosyl-oligosaccharide 1,2-alpha-mannosidase]]
[[Category: Large Structures]]
[[Category: Davies, G J]]
[[Category: Davies GJ]]
[[Category: Males, A]]
[[Category: Males A]]
[[Category: Hydrolase]]
[[Category: Mannosidase glycosidase hydrolysis inhibitor]]