5x33: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
Line 1: Line 1:


==Leukotriene B4 receptor BLT1 in complex with BIIL260==
==Leukotriene B4 receptor BLT1 in complex with BIIL260==
<StructureSection load='5x33' size='340' side='right' caption='[[5x33]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
<StructureSection load='5x33' size='340' side='right'caption='[[5x33]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5x33]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cavpo Cavpo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X33 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5X33 FirstGlance]. <br>
<table><tr><td colspan='2'>[[5x33]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cavia_porcellus Cavia porcellus] and [https://en.wikipedia.org/wiki/Enterobacteria_phage_RB55 Enterobacteria phage RB55]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X33 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X33 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7Y9:4-[[3-[[4-[2-(4-hydroxyphenyl)propan-2-yl]phenoxy]methyl]phenyl]methoxy]benzenecarboximidamide'>7Y9</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.7&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ltb4r ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10141 CAVPO])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7Y9:4-[[3-[[4-[2-(4-hydroxyphenyl)propan-2-yl]phenoxy]methyl]phenyl]methoxy]benzenecarboximidamide'>7Y9</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x33 OCA], [https://pdbe.org/5x33 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x33 RCSB], [https://www.ebi.ac.uk/pdbsum/5x33 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x33 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5x33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x33 OCA], [http://pdbe.org/5x33 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x33 RCSB], [http://www.ebi.ac.uk/pdbsum/5x33 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x33 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9WTK1_CAVPO Q9WTK1_CAVPO] [https://www.uniprot.org/uniprot/A0A097J792_BPT4 A0A097J792_BPT4] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.[HAMAP-Rule:MF_04110]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5x33" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5x33" style="background-color:#fffaf0;"></div>
==See Also==
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Cavpo]]
[[Category: Cavia porcellus]]
[[Category: Lysozyme]]
[[Category: Enterobacteria phage RB55]]
[[Category: Hirata, K]]
[[Category: Large Structures]]
[[Category: Hori, T]]
[[Category: Hirata K]]
[[Category: Kawano, Y]]
[[Category: Hori T]]
[[Category: Yamamoto, M]]
[[Category: Kawano Y]]
[[Category: Yamashita, K]]
[[Category: Yamamoto M]]
[[Category: Yokoyama, S]]
[[Category: Yamashita K]]
[[Category: Helix]]
[[Category: Yokoyama S]]
[[Category: Membrane protein]]