5o0s: Difference between revisions

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<StructureSection load='5o0s' size='340' side='right'caption='[[5o0s]], [[Resolution|resolution]] 1.16&Aring;' scene=''>
<StructureSection load='5o0s' size='340' side='right'caption='[[5o0s]], [[Resolution|resolution]] 1.16&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5o0s]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O0S OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5O0S FirstGlance]. <br>
<table><tr><td colspan='2'>[[5o0s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoanaerobacterium_xylanolyticum_LX-11 Thermoanaerobacterium xylanolyticum LX-11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O0S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O0S FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=9FQ:(3~{a}~{S},4~{R},5~{S},6~{R},7~{R},7~{a}~{R})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{a},4,5,6,7,7~{a}-hexahydrobenzo[d][1,3,2]dioxathiole-4,5,6-triol'>9FQ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.16&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5npf|5npf]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=9FQ:(3~{a}~{S},4~{R},5~{S},6~{R},7~{R},7~{a}~{R})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{a},4,5,6,7,7~{a}-hexahydrobenzo[d][1,3,2]dioxathiole-4,5,6-triol'>9FQ</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucosylceramidase Glucosylceramidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.45 3.2.1.45] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o0s OCA], [https://pdbe.org/5o0s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o0s RCSB], [https://www.ebi.ac.uk/pdbsum/5o0s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o0s ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5o0s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o0s OCA], [http://pdbe.org/5o0s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o0s RCSB], [http://www.ebi.ac.uk/pdbsum/5o0s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o0s ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/F6BL85_THEXL F6BL85_THEXL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Glucosylceramidase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Breen, I Z]]
[[Category: Thermoanaerobacterium xylanolyticum LX-11]]
[[Category: Davies, G J]]
[[Category: Breen IZ]]
[[Category: Offen, W A]]
[[Category: Davies GJ]]
[[Category: Wu, L]]
[[Category: Offen WA]]
[[Category: Hydrolase]]
[[Category: Wu L]]

Latest revision as of 12:19, 22 November 2023

Crystal structure of txGH116 (beta-glucosidase from Thermoanaerobacterium xylolyticum) in complex with unreacted beta Cyclophellitol Cyclosulfate probe ME711

5o0s, resolution 1.16Å

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