7dca: Difference between revisions

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<StructureSection load='7dca' size='340' side='right'caption='[[7dca]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='7dca' size='340' side='right'caption='[[7dca]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[7dca]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DCA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DCA FirstGlance]. <br>
<table><tr><td colspan='2'>[[7dca]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DCA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DCA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4UO:2,3-DIHYDROXANTHOSINE'>4UO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Guanosine_deaminase Guanosine deaminase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.15 3.5.4.15] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4UO:2,3-DIHYDROXANTHOSINE'>4UO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dca OCA], [https://pdbe.org/7dca PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dca RCSB], [https://www.ebi.ac.uk/pdbsum/7dca PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dca ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dca OCA], [https://pdbe.org/7dca PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dca RCSB], [https://www.ebi.ac.uk/pdbsum/7dca PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dca ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/GSDA_ARATH GSDA_ARATH]] Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.<ref>PMID:24130159</ref>
[https://www.uniprot.org/uniprot/GSDA_ARATH GSDA_ARATH] Catalyzes the hydrolytic deamination of guanosine, producing xanthosine and ammonia. Deaminates exclusively guanosine and 2'-deoxyguanosine but no other aminated purines, pyrimidines, or pterines. Deamination of guanosine by GSDA is the only source of xanthosine production in Arabidopsis.<ref>PMID:24130159</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 7dca" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7dca" style="background-color:#fffaf0;"></div>
==See Also==
*[[Deaminase 3D structures|Deaminase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Guanosine deaminase]]
[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Jia, Q]]
[[Category: Jia Q]]
[[Category: Xie, W]]
[[Category: Xie W]]
[[Category: Zeng, H]]
[[Category: Zeng H]]
[[Category: Deamination]]
[[Category: Gsda]]
[[Category: Hydrolase]]
[[Category: Purine metabolism]]

Latest revision as of 16:30, 29 November 2023

The structure of the Arabidopsis thaliana guanosine deaminase bound by xanthosine

7dca, resolution 2.10Å

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