2y4m: Difference between revisions

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<StructureSection load='2y4m' size='340' side='right'caption='[[2y4m]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='2y4m' size='340' side='right'caption='[[2y4m]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2y4m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhom4 Rhom4]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2xw5 2xw5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Y4M FirstGlance]. <br>
<table><tr><td colspan='2'>[[2y4m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodothermus_marinus_DSM_4252 Rhodothermus marinus DSM 4252]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2xw5 2xw5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Y4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Y4M FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GDX:GUANOSINE+5-(TRIHYDROGEN+DIPHOSPHATE),+P-D-MANNOPYRANOSYL+ESTER'>GDX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2y4l|2y4l]], [[2y4j|2y4j]], [[2y4k|2y4k]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GDX:GUANOSINE+5-(TRIHYDROGEN+DIPHOSPHATE),+P-D-MANNOPYRANOSYL+ESTER'>GDX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y4m OCA], [https://pdbe.org/2y4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y4m RCSB], [https://www.ebi.ac.uk/pdbsum/2y4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y4m ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2y4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2y4m OCA], [https://pdbe.org/2y4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2y4m RCSB], [https://www.ebi.ac.uk/pdbsum/2y4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2y4m ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D0MI02_RHOM4 D0MI02_RHOM4]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Mannosyl-3-phosphoglycerate synthase]]
[[Category: Rhodothermus marinus DSM 4252]]
[[Category: Rhom4]]
[[Category: Barry CS]]
[[Category: Barry, C S]]
[[Category: Davies GJ]]
[[Category: Davies, G J]]
[[Category: Davis BG]]
[[Category: Davis, B G]]
[[Category: Flint JE]]
[[Category: Flint, J E]]
[[Category: Gilbert HJ]]
[[Category: Gilbert, H J]]
[[Category: Martinez-Fleites C]]
[[Category: Martinez-Fleites, C]]
[[Category: Nielsen MM]]
[[Category: Nielsen, M M]]
[[Category: Suits MDL]]
[[Category: Suits, M D.L]]
[[Category: Tailford LE]]
[[Category: Tailford, L E]]
[[Category: Yang M]]
[[Category: Yang, M]]
[[Category: Gdp-mannose]]
[[Category: Glycosyltransferase]]
[[Category: Gt family 78 mannosyl-3-phosphoglycerate synthase]]
[[Category: Transferase]]
Retrieved from "https://proteopedia.org/2y4m"