2o2m: Difference between revisions

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==Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand==
==Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand==
<StructureSection load='2o2m' size='340' side='right'caption='[[2o2m]], [[NMR_Ensembles_of_Models | 1 NMR models]]' scene=''>
<StructureSection load='2o2m' size='340' side='right'caption='[[2o2m]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2o2m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O2M FirstGlance]. <br>
<table><tr><td colspan='2'>[[2o2m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O2M FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI0:4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE'>LI0</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BCL2L1, BCL2L, BCLX ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LI0:4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE'>LI0</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o2m OCA], [https://pdbe.org/2o2m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o2m RCSB], [https://www.ebi.ac.uk/pdbsum/2o2m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o2m ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o2m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o2m OCA], [https://pdbe.org/2o2m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o2m RCSB], [https://www.ebi.ac.uk/pdbsum/2o2m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o2m ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/B2CL1_HUMAN B2CL1_HUMAN]] Potent inhibitor of cell death. Inhibits activation of caspases (By similarity). Appears to regulate cell death by blocking the voltage-dependent anion channel (VDAC) by binding to it and preventing the release of the caspase activator, CYC1, from the mitochondrial membrane. Also acts as a regulator of G2 checkpoint and progression to cytokinesis during mitosis.<ref>PMID:19917720</ref> <ref>PMID:21840391</ref>  Isoform Bcl-X(S) promotes apoptosis.<ref>PMID:19917720</ref> <ref>PMID:21840391</ref>
[https://www.uniprot.org/uniprot/B2CL1_HUMAN B2CL1_HUMAN] Potent inhibitor of cell death. Inhibits activation of caspases (By similarity). Appears to regulate cell death by blocking the voltage-dependent anion channel (VDAC) by binding to it and preventing the release of the caspase activator, CYC1, from the mitochondrial membrane. Also acts as a regulator of G2 checkpoint and progression to cytokinesis during mitosis.<ref>PMID:19917720</ref> <ref>PMID:21840391</ref>  Isoform Bcl-X(S) promotes apoptosis.<ref>PMID:19917720</ref> <ref>PMID:21840391</ref>  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Belli, B A]]
[[Category: Belli BA]]
[[Category: Bruncko, M]]
[[Category: Bruncko M]]
[[Category: Ding, H]]
[[Category: Ding H]]
[[Category: Elmore, S W]]
[[Category: Elmore SW]]
[[Category: Fesik, S W]]
[[Category: Fesik SW]]
[[Category: Joseph, M K]]
[[Category: Joseph MK]]
[[Category: Kunzer, A]]
[[Category: Kunzer A]]
[[Category: Martineau, D]]
[[Category: Martineau D]]
[[Category: McClellan, W J]]
[[Category: McClellan WJ]]
[[Category: Mitten, M]]
[[Category: Mitten M]]
[[Category: Ng, S C]]
[[Category: Ng SC]]
[[Category: Nimmer, P M]]
[[Category: Nimmer PM]]
[[Category: Oltersdorf, T]]
[[Category: Oltersdorf T]]
[[Category: Oost, T K]]
[[Category: Oost TK]]
[[Category: Park, C M]]
[[Category: Park CM]]
[[Category: Petros, A M]]
[[Category: Petros AM]]
[[Category: Rosenberg, S H]]
[[Category: Rosenberg SH]]
[[Category: Shoemaker, A R]]
[[Category: Shoemaker AR]]
[[Category: Song, X]]
[[Category: Song X]]
[[Category: Wang, X]]
[[Category: Wang X]]
[[Category: Wendt, M D]]
[[Category: Wendt MD]]
[[Category: Zhang, H]]
[[Category: Zhang H]]
[[Category: Apoptosis]]
[[Category: Bcl]]
[[Category: Complex]]

Latest revision as of 00:13, 28 December 2023

Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand

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