3udo: Difference between revisions

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<StructureSection load='3udo' size='340' side='right'caption='[[3udo]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='3udo' size='340' side='right'caption='[[3udo]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3udo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp. jejuni" smibert 1974]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UDO FirstGlance]. <br>
<table><tr><td colspan='2'>[[3udo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UDO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">leuB, Cj1718c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-isopropylmalate_dehydrogenase 3-isopropylmalate dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.85 1.1.1.85] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3udo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udo OCA], [https://pdbe.org/3udo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3udo RCSB], [https://www.ebi.ac.uk/pdbsum/3udo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3udo ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3udo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udo OCA], [https://pdbe.org/3udo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3udo RCSB], [https://www.ebi.ac.uk/pdbsum/3udo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3udo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/LEU3_CAMJE LEU3_CAMJE]] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.  
[https://www.uniprot.org/uniprot/LEU3_CAMJE LEU3_CAMJE] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Campylobacter fetus subsp. jejuni smibert 1974]]
[[Category: Campylobacter jejuni]]
[[Category: 3-isopropylmalate dehydrogenase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Anderson, W F]]
[[Category: Anderson WF]]
[[Category: Blus, B J]]
[[Category: Blus BJ]]
[[Category: Structural genomic]]
[[Category: Chruszcz M]]
[[Category: Chruszcz, M]]
[[Category: Grimshaw S]]
[[Category: Grimshaw, S]]
[[Category: Minor W]]
[[Category: Minor, W]]
[[Category: Onopriyenko O]]
[[Category: Onopriyenko, O]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Tkaczuk KL]]
[[Category: Tkaczuk, K L]]
[[Category: Csgid]]
[[Category: Oxidoreductase]]
[[Category: Putative isopropylamlate dehydrogenase]]

Latest revision as of 12:47, 17 January 2024

Crystal structure of putative isopropylamlate dehydrogenase from Campylobacter jejuni

3udo, resolution 2.30Å

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