5qib: Difference between revisions
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==PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of HAO1 in complex with FMOPL000388a== | ==PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of HAO1 in complex with FMOPL000388a== | ||
<StructureSection load='5qib' size='340' side='right' caption='[[5qib]], [[Resolution|resolution]] 1.48Å' scene=''> | <StructureSection load='5qib' size='340' side='right'caption='[[5qib]], [[Resolution|resolution]] 1.48Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5qib]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5qib]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5QIB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5QIB FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=GX7:5-(cyclohexylamino)pyrimidine-2,4(1H,3H)-dione'>GX7</scene | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FNR:1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL'>FNR</scene>, <scene name='pdbligand=GX7:5-(cyclohexylamino)pyrimidine-2,4(1H,3H)-dione'>GX7</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5qib FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5qib OCA], [https://pdbe.org/5qib PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5qib RCSB], [https://www.ebi.ac.uk/pdbsum/5qib PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5qib ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/HAOX1_HUMAN HAOX1_HUMAN] Has 2-hydroxyacid oxidase activity. Most active on the 2-carbon substrate glycolate, but is also active on 2-hydroxy fatty acids, with high activity towards 2-hydroxy palmitate and 2-hydroxy octanoate. | ||
==See Also== | |||
*[[Glycolate oxidase 3D structures|Glycolate oxidase 3D structures]] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Homo sapiens]] | ||
[[Category: Arrowsmith | [[Category: Large Structures]] | ||
[[Category: Bezerra | [[Category: Arrowsmith CH]] | ||
[[Category: Bountra | [[Category: Bezerra GA]] | ||
[[Category: Bradley | [[Category: Bountra C]] | ||
[[Category: Brandao-Neto | [[Category: Bradley AR]] | ||
[[Category: Brennan | [[Category: Brandao-Neto J]] | ||
[[Category: Brennan PE]] | |||
[[Category: Douangamath | [[Category: Douangamath A]] | ||
[[Category: Edwards | [[Category: Edwards A]] | ||
[[Category: Krojer | [[Category: Krojer T]] | ||
[[Category: MacKinnon | [[Category: MacKinnon S]] | ||
[[Category: Oppermann | [[Category: Oppermann U]] | ||
[[Category: Talon | [[Category: Talon R]] | ||
[[Category: Yue | [[Category: Yue WW]] | ||
[[Category: | [[Category: Von Delft F]] | ||
Latest revision as of 08:55, 7 February 2024
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of HAO1 in complex with FMOPL000388a
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