6mos: Difference between revisions

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<StructureSection load='6mos' size='340' side='right'caption='[[6mos]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='6mos' size='340' side='right'caption='[[6mos]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6mos]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MOS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MOS FirstGlance]. <br>
<table><tr><td colspan='2'>[[6mos]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosipho_africanus_TCF52B Thermosipho africanus TCF52B]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MOS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MOS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TAM:TRIS(HYDROXYETHYL)AMINOMETHANE'>TAM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8001373&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6mos FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mos OCA], [http://pdbe.org/6mos PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mos RCSB], [http://www.ebi.ac.uk/pdbsum/6mos PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mos ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TAM:TRIS(HYDROXYETHYL)AMINOMETHANE'>TAM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mos FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mos OCA], [https://pdbe.org/6mos PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mos RCSB], [https://www.ebi.ac.uk/pdbsum/6mos PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mos ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
== Function ==
== Publication Abstract from PubMed ==
[https://www.uniprot.org/uniprot/B7IEN1_THEAB B7IEN1_THEAB]
The thioredoxin system is a ubiquitous oxidoreductase system that consists of the enzyme thioredoxin reductase (TrxR), its cofactor nicotinamide adenine dinucleotide phosphate (NAD(P)H) and the protein thioredoxin (Trx). The system has been comprehensively studied from many organisms, such as Escherichia coli (E. coli); however, structural and functional analysis of this system from thermophilic bacteria has not been as extensive. In this study, Thermosipho africanus, a thermophilic eubacterium, Trx1 (TaTrx1) was successfully cloned, overexpressed and purified, to greater than 95% purity. Inspection of the amino acid sequence of TaTrx1 categorized the protein as a putative Trx. Its ability to reduce the interchain disulfides of insulin, in the presence of dithiothreitol, provided further evidence to suggest that it was a Trx. The three dimensional structure of the protein, determined using X-ray crystallography, provided additional evidence for this. The crystal structure was solved in space group P212121 to 1.8 A resolution and showed the characteristic thioredoxin fold; four beta-strands surrounded by three alpha-helices. The active site of TaTrx1 contained two cysteines that formed a disulfide bridge, and was structurally similar to the active site of EcTrx1. Further studies indicated that TaTrx1 was far more stable than Trx1 of E. coli (EcTrx1). The protein could withstand both higher temperatures and higher concentrations of guanidine hydrochloride before denaturing. Our studies have therefore identified a novel thermophilic putative Trx that structurally and functionally behaves like a Trx.


Structure and function of the putative thioredoxin 1 from the thermophilic eubacterium Thermosipho africanus strain TCF52B.,Sahtout N, Kuttiyatveetil JRA, Sanders DAR Biochim Biophys Acta Proteins Proteom. 2019 Apr;1867(4):426-433. doi:, 10.1016/j.bbapap.2019.01.011. Epub 2019 Feb 1. PMID:30716506<ref>PMID:30716506</ref>
==See Also==
 
*[[Thioredoxin 3D structures|Thioredoxin 3D structures]]
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 6mos" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Kuttiyatveetil, J R]]
[[Category: Thermosipho africanus TCF52B]]
[[Category: Sahtout, N]]
[[Category: Kuttiyatveetil JR]]
[[Category: Sanders, D A.R]]
[[Category: Sahtout N]]
[[Category: Catalysis]]
[[Category: Sanders DAR]]
[[Category: Oxidoreductase]]
[[Category: Protein stability]]
[[Category: Thermophile]]
[[Category: Thermosipho africanus]]
[[Category: Thioredoxin]]

Revision as of 14:33, 6 March 2024

Structure of thioredoxin 1 from the thermophilic eubacterium Thermosipho africanus TCF52B

6mos, resolution 1.80Å

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