7khc: Difference between revisions

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====

==Escherichia coli RNA polymerase and rrnBP1 promoter closed complex==

== Structural highlights ==

<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance].

<table><tr><td colspan='2'>[[7khc]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6wr6 6wr6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7KHC OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=7KHC FirstGlance].

</td></tr><tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=7khc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7khc OCA], [https://pdbe.org/7khc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7khc RCSB], [https://www.ebi.ac.uk/pdbsum/7khc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7khc ProSAT]</td></tr>

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.14Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1N7:CHAPSO'>1N7</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=7khc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7khc OCA], [https://pdbe.org/7khc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7khc RCSB], [https://www.ebi.ac.uk/pdbsum/7khc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7khc ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/RPOB_ECOLI RPOB_ECOLI] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.[HAMAP-Rule:MF_01321]

==See Also==

*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]

*[[Sigma factor 3D structures|Sigma factor 3D structures]]

__TOC__

</StructureSection>

[[Category: Escherichia coli K-12]]

[[Category: Large Structures]]

[[Category: ~~Z-disk~~]]

[[Category: Murakami KS]]

[[Category: Qayyum MZ]]

[[Category: Shin Y]]

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-====
+==Escherichia coli RNA polymerase and rrnBP1 promoter closed complex==
-<StructureSection load='7khc' size='340' side='right'caption='[[7khc]]' scene=''>
+<StructureSection load='7khc' size='340' side='right'caption='[[7khc]], [[Resolution|resolution]] 4.14&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
+<table><tr><td colspan='2'>[[7khc]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6wr6 6wr6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7KHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7KHC FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7khc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7khc OCA], [https://pdbe.org/7khc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7khc RCSB], [https://www.ebi.ac.uk/pdbsum/7khc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7khc ProSAT]</span></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.14&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1N7:CHAPSO'>1N7</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7khc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7khc OCA], [https://pdbe.org/7khc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7khc RCSB], [https://www.ebi.ac.uk/pdbsum/7khc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7khc ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/RPOB_ECOLI RPOB_ECOLI] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.[HAMAP-Rule:MF_01321]
+==See Also==
+*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
+*[[Sigma factor 3D structures|Sigma factor 3D structures]]
 __TOC__
 </StructureSection>
+[[Category: Escherichia coli K-12]]
 [[Category: Large Structures]]
-[[Category: Z-disk]]
+[[Category: Murakami KS]]
+[[Category: Qayyum MZ]]
+[[Category: Shin Y]]