3at7: Difference between revisions

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== Function ==
== Function ==
[https://www.uniprot.org/uniprot/Q25C86_9SPHN Q25C86_9SPHN]  
[https://www.uniprot.org/uniprot/Q25C86_9SPHN Q25C86_9SPHN]  
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== Publication Abstract from PubMed ==
A gram-negative Sphingomonas sp. A1 directly incorporates alginate polysaccharide into the cytoplasm via the cell-surface pit and ABC transporter. A cell-surface alginate-binding protein, Algp7, functions as a concentrator of the polysaccharide in the pit. Based on the primary structure and genetic organization in the bacterial genome, Algp7 was found to be homologous to an M75 peptidase motif-containing EfeO, a component of a ferrous ion transporter. Despite the presence of an M75 peptidase motif with high similarity, the Algp7 protein purified from recombinant Escherichia coli cells was inert on insulin B chain and N-benzoyl-Phe-Val-Arg-p-nitroanilide, both of which are substrates for a typical M75 peptidase, imelysin, from Pseudomonas aeruginosa. The X-ray crystallographic structure of Algp7 was determined at 2.10A resolution by single-wavelength anomalous diffraction. Although a metal-binding motif, HxxE, conserved in zinc ion-dependent M75 peptidases is also found in Algp7, the crystal structure of Algp7 contains no metal even at the motif. The protein consists of two structurally similar up-and-down helical bundles as the basic scaffold. A deep cleft between the bundles is sufficiently large to accommodate macromolecules such as alginate polysaccharide. This is the first structural report on a bacterial cell-surface alginate-binding protein with an M75 peptidase motif.
Crystal structure of bacterial cell-surface alginate-binding protein with an M75 peptidase motif.,Maruyama Y, Ochiai A, Mikami B, Hashimoto W, Murata K Biochem Biophys Res Commun. 2011 Feb 18;405(3):411-6. Epub 2011 Jan 14. PMID:21238429<ref>PMID:21238429</ref>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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== References ==
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Latest revision as of 14:01, 13 March 2024

Crystal structure of bacterial cell-surface alginate-binding protein Algp7

3at7, resolution 2.10Å

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