1s6a: Difference between revisions

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[[Image:1s6a.jpg|left|200px]]
[[Image:1s6a.jpg|left|200px]]


{{Structure
<!--
|PDB= 1s6a |SIZE=350|CAPTION= <scene name='initialview01'>1s6a</scene>, resolution 1.69&Aring;
The line below this paragraph, containing "STRUCTURE_1s6a", creates the "Structure Box" on the page.
|SITE=
You may change the PDB parameter (which sets the PDB file loaded into the applet)
|LIGAND= <scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
|ACTIVITY=
or leave the SCENE parameter empty for the default display.
|GENE= GLBN, SLR2097 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1143 Synechocystis sp.])
-->
|DOMAIN=
{{STRUCTURE_1s6a| PDB=1s6a  | SCENE= }}  
|RELATEDENTRY=[[1s69|1S69]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1s6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s6a OCA], [http://www.ebi.ac.uk/pdbsum/1s6a PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1s6a RCSB]</span>
}}


'''The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with azide ligand'''
'''The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with azide ligand'''
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[[Category: Kundu, S.]]
[[Category: Kundu, S.]]
[[Category: 2 on 2 helical fold]]
[[Category: 2 on 2 helical fold]]
[[Category: cyanobacteria]]
[[Category: Cyanobacteria]]
[[Category: globin]]
[[Category: Globin]]
[[Category: heme]]
[[Category: Heme]]
[[Category: hemoglobin]]
[[Category: Hemoglobin]]
[[Category: hexacoordinate]]
[[Category: Hexacoordinate]]
[[Category: iron]]
[[Category: Iron]]
[[Category: oxygen binding]]
[[Category: Oxygen binding]]
[[Category: truncated]]
[[Category: Truncated]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 08:21:18 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:38:03 2008''

Revision as of 05:21, 3 May 2008

File:1s6a.jpg

Template:STRUCTURE 1s6a

The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with azide ligand


Overview

The crystal structures of cyanide and azide-bound forms of the truncated hemoglobin from Synechocystis are presented at 1.8 angstroms resolution. A comparison with the structure of the endogenously liganded protein reveals a conformational shift unprecedented in hemoglobins, and provides the first picture of a hexacoordinate hemoglobin in both the bis-histidyl and the exogenously coordinated states. The structural changes between the different conformations are confined to two regions of the protein; the B helix, and the E helix, including the EF loop. A molecular "hinge" controlling movement of the E helix is observed in the EF loop, which is composed of three principal structural elements: Arg64, the heme-d-propionate, and a three-residue extension of the F helix. Additional features of the structural transition between the two protein conformations are discussed as they relate to the complex ligand-binding behavior observed in hexacoordinate hemoglobins, and the potential physiological function of this class of proteins.

About this Structure

1S6A is a Single protein structure of sequence from Synechocystis sp.. Full crystallographic information is available from OCA.

Reference

Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin., Trent JT 3rd, Kundu S, Hoy JA, Hargrove MS, J Mol Biol. 2004 Aug 20;341(4):1097-108. PMID:15289104 Page seeded by OCA on Sat May 3 08:21:18 2008

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