3g5b: Difference between revisions

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<StructureSection load='3g5b' size='340' side='right'caption='[[3g5b]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='3g5b' size='340' side='right'caption='[[3g5b]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3g5b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G5B FirstGlance]. <br>
<table><tr><td colspan='2'>[[3g5b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G5B FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Unc5b ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g5b OCA], [https://pdbe.org/3g5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g5b RCSB], [https://www.ebi.ac.uk/pdbsum/3g5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g5b ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g5b OCA], [https://pdbe.org/3g5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g5b RCSB], [https://www.ebi.ac.uk/pdbsum/3g5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g5b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/UNC5B_RAT UNC5B_RAT]] Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon repulsion in growth cones may be caused by its association with DCC that may trigger signaling for repulsion. It also acts as a dependence receptor required for apoptosis induction when not associated with netrin ligand. Mediates apoptosis by activating DAPK1. In the absence of NTN1, activates DAPK1 by reducing its autoinhibitory phosphorylation at Ser-308 thereby increasing its catalytic activity (By similarity).  
[https://www.uniprot.org/uniprot/UNC5B_RAT UNC5B_RAT] Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding. Axon repulsion in growth cones may be caused by its association with DCC that may trigger signaling for repulsion. It also acts as a dependence receptor required for apoptosis induction when not associated with netrin ligand. Mediates apoptosis by activating DAPK1. In the absence of NTN1, activates DAPK1 by reducing its autoinhibitory phosphorylation at Ser-308 thereby increasing its catalytic activity (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Buffalo rat]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Wang, R]]
[[Category: Rattus norvegicus]]
[[Category: Wei, Z]]
[[Category: Wang R]]
[[Category: Zhang, M]]
[[Category: Wei Z]]
[[Category: Apoptosis]]
[[Category: Zhang M]]
[[Category: Death domain]]
[[Category: Developmental protein]]
[[Category: Glycoprotein]]
[[Category: Immunoglobulin domain]]
[[Category: Membrane]]
[[Category: Phosphoprotein]]
[[Category: Receptor]]
[[Category: Transmembrane]]
[[Category: Upa]]
[[Category: Zu5]]

Latest revision as of 19:20, 29 May 2024

The structure of UNC5b cytoplasmic domain

3g5b, resolution 2.00Å

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