6ibg: Difference between revisions

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<StructureSection load='6ibg' size='340' side='right'caption='[[6ibg]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
<StructureSection load='6ibg' size='340' side='right'caption='[[6ibg]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[6ibg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bp234 Bp234]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IBG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IBG FirstGlance]. <br>
<table><tr><td colspan='2'>[[6ibg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_virus_P23-45 Thermus virus P23-45]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IBG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IBG FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">P23p86 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=466051 BP234])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ibg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ibg OCA], [https://pdbe.org/6ibg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ibg RCSB], [https://www.ebi.ac.uk/pdbsum/6ibg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ibg ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ibg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ibg OCA], [https://pdbe.org/6ibg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ibg RCSB], [https://www.ebi.ac.uk/pdbsum/6ibg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ibg ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/PORTL_BP234 PORTL_BP234]] Forms the portal vertex of the capsid (By similarity). This portal plays critical roles in head assembly, genome packaging, neck/tail attachment, and genome ejection (By similarity). The portal protein multimerizes as a single ring-shaped homododecamer arranged around a central channel (By similarity). Forms the portal vertex of the capsid. This portal plays critical roles in head assembly, genome packaging, neck/tail attachment, and genome ejection (By similarity).[UniProtKB:A0A1L4BKQ4]  
[https://www.uniprot.org/uniprot/PORTL_BP234 PORTL_BP234] Forms the portal vertex of the capsid (By similarity). This portal plays critical roles in head assembly, genome packaging, neck/tail attachment, and genome ejection (By similarity). The portal protein multimerizes as a single ring-shaped homododecamer arranged around a central channel (By similarity). Forms the portal vertex of the capsid. This portal plays critical roles in head assembly, genome packaging, neck/tail attachment, and genome ejection (By similarity).[UniProtKB:A0A1L4BKQ4]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
*[[Portal protein|Portal protein]]
*[[Portal protein 3D structures|Portal protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bp234]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Antson, A A]]
[[Category: Thermus virus P23-45]]
[[Category: Bayfield, O W]]
[[Category: Antson AA]]
[[Category: Chechik, M]]
[[Category: Bayfield OW]]
[[Category: Cheng, N]]
[[Category: Chechik M]]
[[Category: Dykeman, E C]]
[[Category: Cheng N]]
[[Category: Hesketh, E L]]
[[Category: Dykeman EC]]
[[Category: Klimuk, E]]
[[Category: Hesketh EL]]
[[Category: Minakhin, L]]
[[Category: Klimuk E]]
[[Category: Ranson, N A]]
[[Category: Minakhin L]]
[[Category: Severinov, K]]
[[Category: Ranson NA]]
[[Category: Steven, A C]]
[[Category: Severinov K]]
[[Category: Winkler, D C]]
[[Category: Steven AC]]
[[Category: Auxiliary]]
[[Category: Winkler DC]]
[[Category: Bacteriophage]]
[[Category: Capsid]]
[[Category: Caudovirale]]
[[Category: Hk97]]
[[Category: Siphoviridae]]
[[Category: Thermophage]]
[[Category: Viral protein]]
[[Category: Virus]]