ConSurf Quick Analysis Procedure: Difference between revisions

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Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, journal, Administrators
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Eric Martz (talk | contribs)
ConfirmAccount, Editor, Print3D, Tester, journal, Administrators
30,118 edits
No edit summary
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<ol>
<ol>
<li> Go to the [http://consurf.tau.ac.il ConSurf Server].
<li> Go to the [http://consurf.tau.ac.il ConSurf Server].
<li> Check ''Amino Acids''.
<li> Enter your [[PDB code]] (or upload your [[Atomic coordinate file|PDB file]]).
<li> Check '''Yes''' there is a known protein structure.
<li> Choose one chain from the pull-down ''Select chain identifier'' menu. (ConSurf can only analyze [[Conservation%2C_Evolutionary#Use_Caution_When_Comparing_Conservation_of_Sequence-Different_Chains|one chain at a time]]. Get chain IDs by examining the model in
<li> Enter your [[PDB code]] (or upload your [[Atomic coordinate file|PDB file]]) and click the ''Next'' button.
<li> Choose one chain from the pull-down ''Chain Identifier'' menu. (ConSurf can only analyze [[Conservation%2C_Evolutionary#Use_Caution_When_Comparing_Conservation_of_Sequence-Different_Chains|one chain at a time]]. Get chain IDs by examining the model in
[[FirstGlance in Jmol]].
[[FirstGlance in Jmol]].
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