ConSurf Quick Analysis Procedure: Difference between revisions

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Here is a quick procedure for coloring a protein molecule by [[Introduction to Evolutionary Conservation|evolutionary conservation]]. (This page is a supplement to [[How to see conserved regions]]. This page was updated in July, 2024.)
Updated ''July, 2024''.
 
Here is a quick procedure for coloring a protein molecule by [[Introduction to Evolutionary Conservation|evolutionary conservation]]. (This page is a supplement to [[How to see conserved regions]].)


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Want to make sure your ConSurf result is optimal for answering your questions? See [[Interpreting ConSurf Results]].
Want to make sure your ConSurf result is optimal for answering your questions? See [[Interpreting ConSurf Results]].


Two methods for viewing your results in FirstGlance:
'''Two methods for viewing your results in FirstGlance:'''


* At the ConSurf results page, open ''High Resolution Figures and PDB Files'', and then click ''Download ConSurf PDB File for FirstGlance in Jmol''. Then at [http://firstglance.jmol.org FirstGlance.Jmol.Org], [http://firstglance.jmol.org/where.htm#upload  upload] the downloaded file.
* At the ConSurf results page, open ''High Resolution Figures and PDB Files'', and then click ''Download ConSurf PDB File for FirstGlance in Jmol''. Then at [http://firstglance.jmol.org FirstGlance.Jmol.Org], proceed to [http://firstglance.jmol.org/where.htm#uploading upload] the downloaded file.


* '''Right''' click the link ''PDB File with ConSurf Results in its Header, for FirstGlance in Jmol'', and select Copy Link. Then at [http://firstglance.jmol.org FirstGlance.Jmol.Org], click ''enter a molecule's URL'' and past the link into the slot. This requires that the ConSurf job be recent, since the results will remain on the server for a limited time.
* '''Right''' click the link ''Download ConSurf PDB File for FirstGlance in Jmol'', and select Copy Link. Then at [http://firstglance.jmol.org FirstGlance.Jmol.Org], click ''enter a molecule's URL'' and past the link into the slot. This requires that the ConSurf job be recent, since the results will remain on the server for a limited time.