FirstGlance/Visualizing Conservation: Difference between revisions
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[[FirstGlance/Index|FirstGlance in Jmol]] is the easiest-to-use tool for visualizing, understanding, and sharing protein molecular structure. It offers guided exploration with extensive explanations and examples, yet provides ample power for advanced users. With a few mouse clicks, any molecular scene can be saved as an '''animation (GIF file) ready to drop into a Powerpoint Slide''' -- see examples below, and [http://tinyurl.com/movingmolecules tinyurl.com/movingmolecules]. | [[FirstGlance/Index|FirstGlance in Jmol]] is the easiest-to-use tool for visualizing, understanding, and sharing protein molecular structure. It offers guided exploration with extensive explanations and examples, yet provides ample power for advanced users. With a few mouse clicks, any molecular scene can be saved as an '''animation (GIF file) ready to drop into a Powerpoint Slide''' -- see examples below, and [http://tinyurl.com/movingmolecules tinyurl.com/movingmolecules]. | ||
Among many conveniences offered by FirstGlance, it is easy to see the levels of [[ConSurf/Index|evolutionary conservation determined by ConSurf]] for '''amino acids of special interest'''. Below is an overview with some illustrated examples. Here are [[ConSurf/Index|instructions for running ConSurf]] on proteins of interest. Note that you '''cannot''' use FirstGlance to visualize results from the ConSurf Database, ConSurfDB. Unfortunately, the interface to FirstGlance was removed from ConSurfDB PDB files in 2022. | Among many conveniences offered by FirstGlance, it is easy to see the levels of [[ConSurf/Index|evolutionary conservation determined by the ConSurf Server]] for '''amino acids of special interest'''. Below is an overview with some illustrated examples. Here are [[ConSurf/Index|instructions for running the ConSurf Server]] on proteins of interest. ''Note that you '''cannot''' use FirstGlance to visualize results from the ConSurf Database, ConSurfDB. Unfortunately, the interface to FirstGlance was removed from ConSurfDB PDB files in 2022.'' | ||
There are 2 ways to analyzie your own ConSurf results in FirstGlance: | There are 2 ways to analyzie your own ConSurf results in FirstGlance: | ||
