2ead: Difference between revisions

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<StructureSection load='2ead' size='340' side='right'caption='[[2ead]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
<StructureSection load='2ead' size='340' side='right'caption='[[2ead]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ead]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"actinobacterium_bifidum"_(tissier_1900)_puntoni_1937 "actinobacterium bifidum" (tissier 1900) puntoni 1937]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EAD FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ead]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_bifidum Bifidobacterium bifidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EAD FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2eab|2eab]], [[2eac|2eac]], [[2eae|2eae]], [[2eaf|2eaf]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=PRD_900070:2-fucosyllactose'>PRD_900070</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/1,2-alpha-L-fucosidase 1,2-alpha-L-fucosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.63 3.2.1.63] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ead FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ead OCA], [https://pdbe.org/2ead PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ead RCSB], [https://www.ebi.ac.uk/pdbsum/2ead PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ead ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ead FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ead OCA], [https://pdbe.org/2ead PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ead RCSB], [https://www.ebi.ac.uk/pdbsum/2ead PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ead ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q6JV24_BIFBI Q6JV24_BIFBI]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/2ead_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/2ead_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: 1,2-alpha-L-fucosidase]]
[[Category: Bifidobacterium bifidum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Katayama, T]]
[[Category: Katayama T]]
[[Category: Kato, R]]
[[Category: Kato R]]
[[Category: Nagae, M]]
[[Category: Nagae M]]
[[Category: Tsuchiya, A]]
[[Category: Tsuchiya A]]
[[Category: Wakatsuki, S]]
[[Category: Wakatsuki S]]
[[Category: Yamamoto, K]]
[[Category: Yamamoto K]]
[[Category: Fucosidase]]
[[Category: Glycoside hydrolase]]
[[Category: Hydrolase]]
Retrieved from "https://proteopedia.org/2ead"