2w52: Difference between revisions

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<StructureSection load='2w52' size='340' side='right'caption='[[2w52]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
<StructureSection load='2w52' size='340' side='right'caption='[[2w52]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2w52]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W52 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2w52]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W52 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.56&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2w39|2w39]], [[2cl2|2cl2]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endo-1,3(4)-beta-glucanase Endo-1,3(4)-beta-glucanase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.6 3.2.1.6] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w52 OCA], [https://pdbe.org/2w52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w52 RCSB], [https://www.ebi.ac.uk/pdbsum/2w52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w52 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w52 OCA], [https://pdbe.org/2w52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w52 RCSB], [https://www.ebi.ac.uk/pdbsum/2w52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w52 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q874E3_PHACH Q874E3_PHACH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w52_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w52_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Andersson, E]]
[[Category: Phanerodontia chrysosporium]]
[[Category: Igarashi, K]]
[[Category: Andersson E]]
[[Category: Kawai, R]]
[[Category: Igarashi K]]
[[Category: Samejima, M]]
[[Category: Kawai R]]
[[Category: Sandgren, M]]
[[Category: Samejima M]]
[[Category: Stahlberg, J]]
[[Category: Sandgren M]]
[[Category: Vasur, J]]
[[Category: Stahlberg J]]
[[Category: 3/1]]
[[Category: Vasur J]]
[[Category: 6-glucan]]
[[Category: Basidiomycete]]
[[Category: Beta sandwich]]
[[Category: Beta- glucanase]]
[[Category: Beta-1\]]
[[Category: Extracellular]]
[[Category: Family 16]]
[[Category: Gh16]]
[[Category: Gh7]]
[[Category: Glycosyl hydrolase]]
[[Category: Hydrolase]]
[[Category: Lam16a]]
[[Category: Laminarin]]

Latest revision as of 08:01, 23 October 2024

2 beta-glucans (6-O-glucosyl-laminaritriose) in both donor and acceptor sites of GH16 Laminarinase 16A from Phanerochaete chrysosporium.

2w52, resolution 1.56Å

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