3d0f: Difference between revisions

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<StructureSection load='3d0f' size='340' side='right'caption='[[3d0f]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
<StructureSection load='3d0f' size='340' side='right'caption='[[3d0f]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3d0f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Niteu Niteu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0F FirstGlance]. <br>
<table><tr><td colspan='2'>[[3d0f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea_ATCC_19718 Nitrosomonas europaea ATCC 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0F FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.64&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mrcA, NE2317 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=228410 NITEU])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0f OCA], [https://pdbe.org/3d0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0f RCSB], [https://www.ebi.ac.uk/pdbsum/3d0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0f ProSAT], [https://www.topsan.org/Proteins/MCSG/3d0f TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0f OCA], [https://pdbe.org/3d0f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0f RCSB], [https://www.ebi.ac.uk/pdbsum/3d0f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0f ProSAT], [https://www.topsan.org/Proteins/MCSG/3d0f TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q81ZZ3_NITEU Q81ZZ3_NITEU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0f_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0f_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Niteu]]
[[Category: Nitrosomonas europaea ATCC 19718]]
[[Category: Clancy, S]]
[[Category: Clancy S]]
[[Category: Cuff, M E]]
[[Category: Cuff ME]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Mulligan R]]
[[Category: Mulligan, R]]
[[Category: Big_1156 2]]
[[Category: Cell shape]]
[[Category: Cell wall biogenesis/degradation]]
[[Category: Glycosyltransferase]]
[[Category: Mcsg]]
[[Category: Nitrosomonas europaea]]
[[Category: Penicillin-binding 1]]
[[Category: Peptidoglycan synthesis]]
[[Category: PSI, Protein structure initiative]]
[[Category: Transferase]]
[[Category: Transmembrane]]
[[Category: Unknown function]]