3gt2: Difference between revisions

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<StructureSection load='3gt2' size='340' side='right'caption='[[3gt2]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='3gt2' size='340' side='right'caption='[[3gt2]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3gt2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_paratuberculosis"_(bergey_et_al._1923)_krasil'nikov_1941 "bacillus paratuberculosis" (bergey et al. 1923) krasil'nikov 1941]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GT2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3gt2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_avium_subsp._paratuberculosis Mycobacterium avium subsp. paratuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GT2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MAP1272c, MAP_1272c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1770 "Bacillus paratuberculosis" (Bergey et al. 1923) Krasil'nikov 1941])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gt2 OCA], [https://pdbe.org/3gt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gt2 RCSB], [https://www.ebi.ac.uk/pdbsum/3gt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gt2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gt2 OCA], [https://pdbe.org/3gt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gt2 RCSB], [https://www.ebi.ac.uk/pdbsum/3gt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gt2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q740S0_MYCPA Q740S0_MYCPA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/3gt2_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/3gt2_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Bannantine, J P]]
[[Category: Mycobacterium avium subsp. paratuberculosis]]
[[Category: Bouyain, S]]
[[Category: Bannantine JP]]
[[Category: Geisbrecht, B V]]
[[Category: Bouyain S]]
[[Category: Lingle, C K]]
[[Category: Geisbrecht BV]]
[[Category: McWhorter, W J]]
[[Category: Lingle CK]]
[[Category: Ramyar, K X]]
[[Category: McWhorter WJ]]
[[Category: Antigen]]
[[Category: Ramyar KX]]
[[Category: P60 domain]]
[[Category: Unknown function]]

Latest revision as of 09:12, 30 October 2024

Crystal Structure of the P60 Domain from M. avium paratuberculosis Antigen MAP1272c

3gt2, resolution 1.75Å

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